Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0983 ATGGTAAGTGTTCCAAGCAGCGGTTTCCTTACCATAGTGACGGTTCGATGTGGGCATTGTGCTAATTTACTGTCAGTCAACATGGGAGCTTCTCTTCAAACATTACCTCCTCAAGCGCTTCAGTTACAGAAACAGCAGCTAAGCTTTGAAGAATCAAGCAACAGCAGAGAAGAGGGATCATCATCTTCAAAATGCAGTAAATTTGCTGCATTTGAGTCTGCAGAGCATGAACAGCATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAAAGAGTTCCTTCTGCTTATAACAGGGAGGAAATACAAAGGATTAAGGCTAGTAATCCAGATATTAGCCACAGGGAGGCGTTTAGCACTGCGGCCAAAAACTGGGCACATTTTCCTCATATTCACTTTGGATTAAAGCTGGATGGCAACAACAAGCAAGCAAAGTTGGACCAGGAAGAAGGAATTCAAAATTCCAATGGCCTTTATTGA 480 0.4354 MVSVPSSGFLTIVTVRCGHCANLLSVNMGASLQTLPPQALQLQKQQLSFEESSNSREEGSSSSKCSKFAAFESAEHEQHRIPPIRPPEKRQRVPSAYNREEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNNKQAKLDQEEGIQNSNGLY 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0983 159 PANTHER PROTEIN YABBY 6-RELATED 1 147 IPR006780 GO:0007275
Lele10g0983 159 MobiDBLite consensus disorder prediction 70 95 - -
Lele10g0983 159 MobiDBLite consensus disorder prediction 49 95 - -
Lele10g0983 159 Pfam YABBY protein 1 135 IPR006780 GO:0007275
Lele10g0983 159 MobiDBLite consensus disorder prediction 49 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0983 Lele-ChrLele10 21135197 21139584 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0983 2 159 C2C2-YABBY Transcription Factor Family AT1G08465 61.212 3.96e-62 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele10g0983 YABBY 1.9e-53 CL0114