Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0976 ATGAGCCGTCGGGATATATATATGTATATGTATATGGCCAGAGGGGATGGAATCTCCATTGATTCAGATCAACTTCGGAGCAGTTTCTTGATCCACGAGCCCTTGGTGTTAAACTCTTTGCCTGAAGATTCCACCGGCGGAAGCAATAAGTCGTCGCAGCTCATCGGAGCGCCGATGGATGGAGGCGGCAAGAGATTTCCCTTACAGGTGAACCTCAATTATTCCCTGCTGAAAGACGAAGAATCTCCCACTGATCATCATGAAAATGAACCCTCTCATCATCATCGGGATCATGACGACCTTAGAGCCCACATCGAAGAAATGGATTTCTTCTCCAACAAGGACGACAATCTCGTCGCCTCGTCCTCCTCCAGCTCCGCCGCCTTCGCCCTTCACAGACTTGATTTCCTATCCCCGCCACCGCCCTTGCCCTTTAATGTCAACACTGGTTTAAATCTTCTCACTACCAATATTGGTAGTAATCATCATTCTGCGGTAGAAGATGGTTTATCCATCCCAGTACTTAAAACGGCTCAAGAAGAGTATGATGCTATTAGAGCACGGTTTAAGAAAATGAAGGATGAAAACGATTGCTTGAGAGAAATGCTTAATGAAGTGACTAACAATTACAACGTGCTGCATTCGCGATATATGAATATAGTGCCGAAGCAGAACATCAACAACAATGGTGAAGACATGTTTGACGACGACGAGAAAGGAAGAAACAAACAATTAATCGAAGGAGCATCATCATCAGTAGTACCTAGACAGTTTATGGATCTTGGACTTGCCACTAATAACGTTAATAATGTTGATAAATCTTCTCTTACAGAAGCACAACAAGATTTTGACTCTACTAGAAAGAGTCAACTCAGTGATGCAAGACTTGTGCTTCAACAAGAAAAGAAAGAACTTGGTAAGAATATTATTATAAGAGATGACGAAAATAGCCAACCAGCTCAAGTTTTCTCCACTAATAATAATAATAAGATCCCAAAAACCAGTCCTCCTGAAACTGTTGATCAAGCAGAGATTACTATGAGAAAGGCAAGAGTTTCAGTTCGAACTCGATCGGAAGACGCCATGGTACAAAGATGTGCTGAGGACAGAACAATCCTGGTTACAACCTACGAAGGGAATCATAACCATCCTTTGCCTCCGGCGGCGATGGCGATGGAGCAGACCACCTCGTCGGCTGCTAGAGTTTTGCTGTCAGGATCATCTTCAAGTTCAGATGGTTTAATGAATCCAAATTTTCTCGCAAGGGCTTTCCTTCCGTTTTCCTCTAGCATGGCTACTATCTCAGCTTCAGCTCCGTTTCCCACTGTCACATTGGACCTAACTCAAAACCCTAACCCTTTTTTCTTCCCGAGGCCTCCGACGACTCCGTTTCAAATTCCATTCGAACCTCACAACATGGTCAATTCTCTGACTTCATTTCTGCCTCAGATATTTGCTCCGGGGGCGGCGATTTACAATCAGTCCAAGTTTTCGGGGCTACAAATGTCTCAAAATCATGACGCTTCCACGTCCTCTCAGGCGGCGCCTCCAACGCAGCAACTGGCTGACTCCGTGAGTGCTGCCATCGCCGCTGACTCCAACTTTACGGCAGCTCTGACGGCGGCTATCACTTCCATTATCGGTGGTGCTCAGCAAAACAATAGCAACAACAGCAATGGTGGTAATTTCATGTCTAATAATGATAGCAATGGCAATATTACGAATGGTAATAACAATAATAGTTCCAGCTGA 1752 0.4458 MSRRDIYMYMYMARGDGISIDSDQLRSSFLIHEPLVLNSLPEDSTGGSNKSSQLIGAPMDGGGKRFPLQVNLNYSLLKDEESPTDHHENEPSHHHRDHDDLRAHIEEMDFFSNKDDNLVASSSSSSAAFALHRLDFLSPPPPLPFNVNTGLNLLTTNIGSNHHSAVEDGLSIPVLKTAQEEYDAIRARFKKMKDENDCLREMLNEVTNNYNVLHSRYMNIVPKQNINNNGEDMFDDDEKGRNKQLIEGASSSVVPRQFMDLGLATNNVNNVDKSSLTEAQQDFDSTRKSQLSDARLVLQQEKKELGKNIIIRDDENSQPAQVFSTNNNNKIPKTSPPETVDQAEITMRKARVSVRTRSEDAMVQRCAEDRTILVTTYEGNHNHPLPPAAMAMEQTTSSAARVLLSGSSSSSDGLMNPNFLARAFLPFSSSMATISASAPFPTVTLDLTQNPNPFFFPRPPTTPFQIPFEPHNMVNSLTSFLPQIFAPGAAIYNQSKFSGLQMSQNHDASTSSQAAPPTQQLADSVSAAIAADSNFTAALTAAITSIIGGAQQNNSNNSNGGNFMSNNDSNGNITNGNNNNSSS 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0976 583 MobiDBLite consensus disorder prediction 40 60 - -
Lele10g0976 583 MobiDBLite consensus disorder prediction 557 583 - -
Lele10g0976 583 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 178 363 IPR044810 GO:0003700
Lele10g0976 583 Gene3D WRKY domain 326 387 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele10g0976 583 MobiDBLite consensus disorder prediction 319 340 - -
Lele10g0976 583 ProSiteProfiles WRKY domain profile. 363 386 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele10g0976 583 Coils Coil 175 209 - -
Lele10g0976 583 MobiDBLite consensus disorder prediction 41 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0976 Lele-ChrLele10 21021013 21023317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0976 107 559 WRKY Transcription Factor Family AT1G62300 37.209 6.45e-67 225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1128 31 17923364 17933343 Lele10g0976 10 21021013 21023317 CCT
Lele32g0398 32 2518085 2521142 Lele10g0976 10 21021013 21023317 CCT
Lele10g0976 10 21021013 21023317 Lele10g0976 10 21021013 21023317 ECH
Lele10g0976 10 21021013 21023317 Lele11g1026 11 17415959 17419107 hybridization
Lele10g0976 10 21021013 21023317 Lele12g0301 12 2765513 2767649 hybridization