Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0972 ATGAAGAAGGGACCCTGGACAACAACAGAAGATGAGATGTTGAGAGAATACGTAAAGAAGCACGGCGAAGGAAACTGGATTAGCGTGAGCAAGAACACTGGGCTGGCTCGCAGCGGCAAAAGTTGCAGACTCCGATGGGCAAATCATCTTCGGCCTAATCTCAAGAAAGGCCCTTTTTCTCAAGACGAGCAAGATAAGATCATCTACCTGCACTCCAAGTTCGGTAACAAATGGTCTCGCATTGCCGCTGCGTTACCTGGAAGAACGGACAACGAGGTAAAGAATTTCTGGAATGGTAGGACGAAAAGATGCTTCAACACTGGGACGCCTCTTTATCCTCCTTCACTTCAGCCCATCAACAACGTTCATCCTCCTCCTCCTCCTTCCTCTCTCCAAAACTCCACCCATTTTCCTCATCTCAGCACTGCTCAGCTTGCTGCAAATCTGCAGGATCTGCTATCAACCCTTGGTTCTCCATATGGCCCCTCCCTCTCATTGCCCCCTCTTTCCACTCTTATCAATATTCCCCCACCTGCACCACCGTCTCCTGATTCAGCCTTCGCTATTCATGACTGCTATCAACCAGACAACGGCCTGCTCGAGGATCTTCTTGGCGAGGCTCCTGCACTTCCTCATGACGAGGATTCAACCATACCAATAATAGACTTATCTGATGACCAGATGGATGATTCTCTCTCGTTACCATTATCCACAGGCACGCTGTTCTTTCTTCTTCTTTTTTATGCGTTACATGGTTGCTTGACAGTTTTTCGTCCGAAATGCCAATGCTCGATTGGAATGGAGGGCAAGGCCAATCAAGCACTTTGGCTGGCCCTAATAATGCTCAGTAATTTCATTGGGATCTTGGGAATTGCTGCAACAACATACCTGGAGTATGCTGAATTTGATTCTCCAGATGATGGAGTTGGCTTGAATGCCTCTTTGGATGCTTATGTATGTACAAATCCTCCTTGTGATGAGTATATTTAA 990 0.4707 MKKGPWTTTEDEMLREYVKKHGEGNWISVSKNTGLARSGKSCRLRWANHLRPNLKKGPFSQDEQDKIIYLHSKFGNKWSRIAAALPGRTDNEVKNFWNGRTKRCFNTGTPLYPPSLQPINNVHPPPPPSSLQNSTHFPHLSTAQLAANLQDLLSTLGSPYGPSLSLPPLSTLINIPPPAPPSPDSAFAIHDCYQPDNGLLEDLLGEAPALPHDEDSTIPIIDLSDDQMDDSLSLPLSTGTLFFLLLFYALHGCLTVFRPKCQCSIGMEGKANQALWLALIMLSNFIGILGIAATTYLEYAEFDSPDDGVGLNASLDAYVCTNPPCDEYI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0972 329 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 124 - -
Lele10g0972 329 Pfam Myb-like DNA-binding domain 56 98 IPR001005 -
Lele10g0972 329 Pfam Myb-like DNA-binding domain 3 50 IPR001005 -
Lele10g0972 329 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Lele10g0972 329 CDD SANT 58 98 IPR001005 -
Lele10g0972 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 55 105 IPR017930 -
Lele10g0972 329 Gene3D - 58 103 - -
Lele10g0972 329 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Lele10g0972 329 CDD SANT 5 50 IPR001005 -
Lele10g0972 329 Gene3D - 2 55 - -
Lele10g0972 329 SUPERFAMILY Homeodomain-like 2 97 IPR009057 -
Lele10g0972 329 SMART sant 55 103 IPR001005 -
Lele10g0972 329 SMART sant 2 52 IPR001005 -
Lele10g0972 329 FunFam MYB-related transcription factor 2 55 - -
Lele10g0972 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0972 Lele-ChrLele10 20965247 20966606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0972 1 117 MYB Transcription Factor Family AT2G32460 69.231 2.71e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0972 Myb_DNA-binding 5.2e-14 CL0123