Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0970 ATGACTTGGAAGAACAGAGGTGAGCAATCTTCCAGGAGCCTTGTGTCACAGAAATGGGCTCTTTTTCTCTGTCTCGCAAGTTTCTGTGCCGGCATGCTCTTCACTAACAGGATGTGGAGTATTCCCGAACCTAAAGGGCTTGCAAGAACAACAGCAATGGAAGCAGAAACATTGAATGTGGTTTCTGAGGGTTGTAATTCGAGAATTTTGCAAGAGAAGGAAGTGAAGCGTGACACTAAAAACTTTCAGGAAGTTCCCAAGTCTCATAATGGCATACAAACTTTGGATAAAACAATTTCAAACCTAGAGATGGAATTAGCTGCTGCAAGAGCAGCTCAGGAGTCTATAAGAAATGGCGCTCCTGTATCAGGAGAACATCTTAAGAGAGCTGAATCTGAATCCCCTGGTAAGAGAAGGTACCTAATGGTCATAGGAATAAATACTGCATTTAGCAGCAGGAAAAGAAGAGACTCAGTTCGTGCCACCTGGATGCCACAAGGTGAAAAAAGAAGGAAGCTAGAGGAAGAGAAGGGCATTGTTGTCCGCTTTGTGATTGGTCACAGTGCTACTTCTGGGGGTATCCTAGACAGAGCTATTGAAGCAGAGGACAACAAGCATGGGGATTTCTTAAGACTGGACCATGTAGAGGGATACCTTGACTTGTCAGCAAAGACGAAGACTTACTTTGCAACTGCTGTTAAATTATGGGATGCTGATTTCTATGTCAAAGTCGATGATGATGTTCATGTAAATATAGGAACACTAGGAGAAACTCTGGTTAGGCACCGTCCAAAACCACTGATATACATTGGTTGCATGAAATCTGGCCCCGTCCTTTCTCAAAAAGGGGTAAGGTACCATGAACCTGAATATTGGAAATTTGGTGAGACTGGAAACAAATACTTCCGTCATGCCACGGGACAGTTGTACGCCATTTCAAAAGATTTGGCTACATATATATCAAATAACCAGCAAGTTCTTCACAAGTATGCTAATGAGGATGTCTCGCTAGGAGCTTGGTTTATTGGACTTGATGTGAAGCATATAGATGATCGAAGACTTTGCTGCGGCACTCCCCCAGATTGTGAGTGGAAGGCCCAAGCAGGGAACGTATGTGTTGCTTCATTTGATTGGAGCTGCAGTGGAATTTGCAGGTCTGCAGATAGGATCAAAGAGGTTCATAGGCGATGTGGAGAAAGTGAGAAAGCTTTGTGGAAAGCCTCTTTCTAG 1230 0.4366 MTWKNRGEQSSRSLVSQKWALFLCLASFCAGMLFTNRMWSIPEPKGLARTTAMEAETLNVVSEGCNSRILQEKEVKRDTKNFQEVPKSHNGIQTLDKTISNLEMELAAARAAQESIRNGAPVSGEHLKRAESESPGKRRYLMVIGINTAFSSRKRRDSVRATWMPQGEKRRKLEEEKGIVVRFVIGHSATSGGILDRAIEAEDNKHGDFLRLDHVEGYLDLSAKTKTYFATAVKLWDADFYVKVDDDVHVNIGTLGETLVRHRPKPLIYIGCMKSGPVLSQKGVRYHEPEYWKFGETGNKYFRHATGQLYAISKDLATYISNNQQVLHKYANEDVSLGAWFIGLDVKHIDDRRLCCGTPPDCEWKAQAGNVCVASFDWSCSGICRSADRIKEVHRRCGESEKALWKASF 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0970 409 FunFam Hexosyltransferase 109 355 - -
Lele10g0970 409 Gene3D - 137 354 - -
Lele10g0970 409 Pfam Galactosyltransferase 154 351 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele10g0970 409 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 96 351 IPR002659 GO:0006486|GO:0016020|GO:0016758
Lele10g0970 409 Coils Coil 92 112 - -
Lele10g0970 409 Pfam Domain of unknown function (DUF4094) 16 111 IPR025298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0970 Lele-ChrLele10 20934551 20938100 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0970 1 409 Glycosyltransferase AT1G05170 78.537 0.0 688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0970 10 20934551 20938100 Lele29g0438 29 2675315 2676511 CCT
Lele10g0970 10 20934551 20938100 Lele30g0967 30 13276261 13277406 CCT
Lele10g0970 10 20934551 20938100 Lele31g1106 31 17791627 17792820 CCT
Lele10g0970 10 20934551 20938100 Lele32g0419 32 2642419 2643603 CCT
Lele10g0970 10 20934551 20938100 Lele10g0970 10 20934551 20938100 ECH
Lele10g0970 10 20934551 20938100 Lele11g1015 11 17259513 17263001 hybridization
Lele10g0970 10 20934551 20938100 Lele12g0306 12 2854208 2858054 hybridization