Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0962 ATGGCTGTAGCTTCAACATTATTCCTTCTGGTTTTCTGGTTATGGATTCCCACAGAAGCTGTGGGAAGAGCAGGAAATAGTACCATGAAAAACGCTACTGTCTCTTCGAGACCGAATGTTGTTAGAATTGGAGCCCTGTTTACGTTTGATTCAGTCATTGGAAGATCTGCTAAACCTGCAATTTTGGCTGCTGCTGATGATATTAATTCTGATATAAGCATTCTCGACGGGATAAAGCTCGAAGTTATTTTACATGATACCAACTGCAGTGGATTTCTTGGAACCCTAGAAGCTTTGCGGTTCATGGAGAATGATGTGGTTGCTGTTATCGGTCCACAATCTTCTGGTATAGCTCATGTGATCTCTCATGTTGTTAATGAACTTCATGTACCTCTTCTGTCATTCGGGGCGACCGATCCTACTCTGTCTTCTCTGCAGTACCCTTATTTCATCCGAACTACGCAAAATGATCATTTCCAGATGTATGCAGTTGCAGACTTGATTGAATATTATGGATGGAGAGAAGTAATCGCCATTTTCGTGGATGATGATAATGGAAGAAATGGAGTTTCTGTATTAGGCGACGCGCTCGCGCAGAAACGTGCCAGGATCTCATACAAGGCAGCTTTCCCTCCAGATGCTTCTAGAACTGCCATAAATGAGCTGTTAAATGAAGTGAATTTAATGGAATCACGGGTCTATGTTCTTCATGTGAATCCTGATTCAGGTTTGGACATTTTCTCTCTTGCGAAAAAGCTTGGCATGATGACCAACGGCTATGTTTGGATTGCAACTGATTGGCTTCCTTCAGTTCTTGATTCGCAATCACCAGCTAGCCTTGAAACCTTGAATCTTTTACAAGGTGTGGTCGCATTTCGTCATCACGTTCCTTATACCGATACGAAGAACAATCTTCTCTCTAAGTTGAAAAAACTGAACAACAGTAAGATTGCAAGCTTCAATTCTTATGCTTTGTATGCATATGATTCTGTCATGCTAGCTGCCCATGCTTTGCATGATTTTCTCAATCATGGTGGAACCATATCTTTCTCCAATGACCCTAACTTACATGACACTAATGGAAGTTTGTTAAATTTATCATCGCTTCGAACTTTCAACGGTGGCCCCAAGTTTCTGCAGACAATCCTGAGAATGAATTTAACCGGTGTTAGCGGCCAAATTCAGTTTGATAAGGACAAGAACTTACTTCGCCCGGCATATGATATTGTAAACATCGGTGCATCGGGTCCTCGGATTATCGGTTATTGGTCTAATCACTCTGGTCTTACAGAGATAGCTCCTGAAAATTTGTACTCAAAATCATCTAACAAGTCAACTGGCAATAATAGATATCTTTACAATGTGATATGGCCAGGATTGACATCAATTACACCCAGAGGATGGGTTTTCCCTAATAATGGAAAACCACTGAGAATTGCAGTGCCGAATCGAGTAAGCTTCACCAAGTTTGTTGGCAAAGACAAGGACCCTCCAGGCGTAAAAGGTTTTAGCATTGATGTCTTCGAAGCAGCGTTGAATTTATTGCCTTATCCTGTCCCTAAGCAATATATACTATTTGGACAAGGTGATAGAAATCCTAACTATGATGATCTTGTGAATCAGGTTGCACAAAATAAATATGATGCTGCTGTTGGGGATGTTACCATTGTCACAAACAGGACAAGAATTGTGGATTTTACTCAACCTTACATAACTTCAGGGTTGGTTGTTGTTGTTGCTGTTAGAGAGGTAAAGTCAAGCCCATGGTCTTTCCTTAAGCCATTTACTGCACAAATGTGGTTTGTCACTGGTGCCTTTTTCCTTTTCGTTGGAGCTGTCGTATGGATTCTCGAACACCGGCACAATCGCGAGTTCCGAGGACGACCCAGGAAACAACTCATGACAATCTTCTGGTTTAGCTTCTCAACAATGTTTTTCTCACACAGAGAAAACACGGTGAGTGCTCTGGGGAGATTGGTGCTAATCATATGGCTTTTTGTGGTGCTAATTATCAATTCAAGCTACACAGCTAGCTTGACATCAATTCTCACAGTGCAGCAACTTTCATCACAAATTGAAGGCATTGACAGTTTGATCTCAAGCACTCAACCGATCGGAGTTCAAGACGGCTCATTCGCCCGAAAGTATCTCATCGACGAGCTTAATATAGCCGAAGCAAGAATCGTTATATTGAAAAATCTGCAGGACTATGTTGATGCCCTTACACGTGGACCTAGAAACGGAGGGGTGGTAGCCGTTGTTGATGAGCTTCCTTATATTGAAATCCTCATGTCCAGCACCGATTGTCAGTTCAGAACTGTAGGCCAAGAATTCACAAAAAGTGGATGGGGATTTGTAAGTATCTTATCCTTTTAG 2376 0.4175 MAVASTLFLLVFWLWIPTEAVGRAGNSTMKNATVSSRPNVVRIGALFTFDSVIGRSAKPAILAAADDINSDISILDGIKLEVILHDTNCSGFLGTLEALRFMENDVVAVIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYPYFIRTTQNDHFQMYAVADLIEYYGWREVIAIFVDDDNGRNGVSVLGDALAQKRARISYKAAFPPDASRTAINELLNEVNLMESRVYVLHVNPDSGLDIFSLAKKLGMMTNGYVWIATDWLPSVLDSQSPASLETLNLLQGVVAFRHHVPYTDTKNNLLSKLKKLNNSKIASFNSYALYAYDSVMLAAHALHDFLNHGGTISFSNDPNLHDTNGSLLNLSSLRTFNGGPKFLQTILRMNLTGVSGQIQFDKDKNLLRPAYDIVNIGASGPRIIGYWSNHSGLTEIAPENLYSKSSNKSTGNNRYLYNVIWPGLTSITPRGWVFPNNGKPLRIAVPNRVSFTKFVGKDKDPPGVKGFSIDVFEAALNLLPYPVPKQYILFGQGDRNPNYDDLVNQVAQNKYDAAVGDVTIVTNRTRIVDFTQPYITSGLVVVVAVREVKSSPWSFLKPFTAQMWFVTGAFFLFVGAVVWILEHRHNREFRGRPRKQLMTIFWFSFSTMFFSHRENTVSALGRLVLIIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDSLISSTQPIGVQDGSFARKYLIDELNIAEARIVILKNLQDYVDALTRGPRNGGVVAVVDELPYIEILMSSTDCQFRTVGQEFTKSGWGFVSILSF 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0962 791 FunFam Glutamate receptor 747 783 - -
Lele10g0962 791 Pfam Bacterial extracellular solute-binding proteins, family 3 497 784 IPR001638 -
Lele10g0962 791 SUPERFAMILY Periplasmic binding protein-like I 36 468 IPR028082 -
Lele10g0962 791 FunFam Glutamate receptor 156 324 - -
Lele10g0962 791 SMART GluR_14 478 790 IPR001320 GO:0015276|GO:0016020
Lele10g0962 791 CDD PBP1_GABAb_receptor_plant 42 431 IPR044440 -
Lele10g0962 791 Pfam Receptor family ligand binding region 58 412 IPR001828 -
Lele10g0962 791 Gene3D - 472 587 - -
Lele10g0962 791 PIRSF IGluLR_plant 1 787 IPR017103 -
Lele10g0962 791 Gene3D - 588 709 - -
Lele10g0962 791 Gene3D - 60 404 - -
Lele10g0962 791 FunFam Glutamate receptor 472 588 - -
Lele10g0962 791 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 786 - -
Lele10g0962 791 FunFam Glutamate receptor 588 718 - -
Lele10g0962 791 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 114 142 - -
Lele10g0962 791 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 245 268 - -
Lele10g0962 791 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 54 70 - -
Lele10g0962 791 Pfam Ligand-gated ion channel 597 702 IPR001320 GO:0015276|GO:0016020
Lele10g0962 791 Gene3D - 156 429 - -
Lele10g0962 791 SUPERFAMILY Periplasmic binding protein-like II 453 786 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0962 Lele-ChrLele10 20821248 20824397 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0962 37 791 Ion Channels AT1G05200 67.152 0.0 1083