Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0958 ATGCCTGCCGGTATAATGATTCCGGCGAGAAATATGACCTCGGTGATCGGAAGAAACGGCAGCGTTGGTGGGTTTGGATCATCCTCAGCTCTCCCTCTCAACCAGCCAAACATGATGGAAGCAGGTCATCAGCTCCACCTCCCATTGGACATGGCTCCCAACACTACCTCCGAGAGCAATGTCCCCAGAATCCGAGAAGACGACTTCGACAGTGCCACTAAGTCCGGCAGTGAAAACCAGGAAGCCGCCTCTGGCGACGACCATGATCCCCGTCCCAACAAGAAGAAGCGCTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCTTTCTTTAAGGAGTGTCCGCATCCAGATGACAAGCAGAGAAAGGAACTGAGCCGGGAATTAGGGTTAGAGCCATTGCAGGTCAAGTTTTGGTTCCAAAACAAGCGAACTCAGATGAAGACCCATCATGAACGGCAAGAGAACTCACAACTTAGAGCTGAAAATGACAAGCTTCGAGCAGACAACATGAGGTATAGAGAAGCTCTTAGCAATGCCTCATGTCCAAATTGCGGTGGACCAACCGCCATAGGTGAAATGTCTTTCGATGAACATCATCTGAGAATGGAAAATGCTCGCCTACGAGAAGAGATTGATAGGATTTCAACAATAGCTGCAAAGTACGTAGGGAAGCCAGTGGTGAACTATCCATTGCTTTCACCAACAAGTAGTATTCCTCCACGGCCACTGGAACTGGGTGTGGGTGGTTTTGGTGTTGGCGACGTATATGGAGGTGGTGGAGATGTTGTTAGGTCTATGGGTGGGCCGAGCGGAGCTGATAAGCCGATGATAATAGAGCTAGCTGTGGCGGCAATGGAAGAGCTTGTTAGAATGGCACAAATGGGTGAGCCCTTATGGATGACGACTCTTGATGGAACTACCACAGTTCTTAACGAGGATGAATATATCAGAAGTTTCCCTCGTGGGATGGGTCCAAAGCCTGCTGGATTCAAATGTGAAGCTTCTCGAGAAACTACTGTTGTTATCATGAACCATATTAGTCTTGTTGAGATTCTCATGGATGTGAATCAATGGTCCACAGTGTTCTCTGGTATAGTCTCAAGAGCAATGACTCTGGAAGTTTTATCAACAGGGGTGGCTGGGAACTACAATGGAGCCTTGCAAGTGATGACGGCAGAGCTGCAAGTACCTACACCACTAGTGCCAACTCGAGAGAGTTATTTTGTGAGATATTGCAAACAGCACGGGGAAGGGACATGGGCAGTGGTGGATGTGTCGTTGGATAATTTGTGCCCTAGCCCTTCAGTTAGATGTAGAAGAAGGCCTTCCGGCTGCTTAATTCATGAAATGCCCAATGGCTACTCAAAGGTGACGTGGGTTGAGCATGTAGAGGTTGACGATAGAGGAGTTCATGATCTCTACAAGCAGCTCGTCAGCTCTGGACATGCTTTTGGGGCAAAACGTTGGGTTGCTACCTTGGATCGACAATGTGAAAGGCTTGCTAGTTCCATGGCAACAAATAGTCCTATGGGTGATGTTGGAGTGATAACGAATCAAGAAGGGAGGAAGAGTATGCTGAAACTGGCAGAGAGAATGGTGATGAGTTTTTGTTCAGGAGTGAGTGCTTCTACTGCTCACACGTGGACTACACTCTCTGGAACTGGAGCTGATGACGTCCGGGTCATGACCCGAAAGAGTGTGGATGACCCGGGAAGGCCTCCTGGCATTGTTCTCAGTGCTGCAACTTCTTTCTGGCTTCCAGTTCCCCCTAATCGTGTCTTTGATTTCCTCCGTGATGAGAATTCCAGAAACGAGTGGGATATTCTTTCAAATGGTGGAGTAGTCCAAGAAATGGCACATATAGCTAATGGCCAGGACACAGGGAATTGTGTATCACTACTTCGGGTAAATAGTGCGAATTCGAGCCAAAGCAATATGTTGATACTGCAAGAAAGCTGCAGAGACACAACGGGGTCGTTTGTGGTATATGCACCAGTGGATATAGTGGCAATGAACGTGGTTCTAAATGGAGGGGATCCTGATTACGTGGCACTTCTTCCTTCTGGATTTGCTATACTGCCAGATGCAAGCACGACGGCGACGACGGGACATAATAATGGTGGATCTCTCTTGACTGTTGCATTCCAGATTTTGGTTGACTCAGTTCCCACAGCTAAACTATCTCTTGGATCTGTTGCCACTGTCAATAATCTCATTGCCTGCACTGTTGAGAGAATCAAGGCTTCTTTATCCTGTGAAGCTCCCTAA 2277 0.4809 MPAGIMIPARNMTSVIGRNGSVGGFGSSSALPLNQPNMMEAGHQLHLPLDMAPNTTSESNVPRIREDDFDSATKSGSENQEAASGDDHDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTHHERQENSQLRAENDKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRMENARLREEIDRISTIAAKYVGKPVVNYPLLSPTSSIPPRPLELGVGGFGVGDVYGGGGDVVRSMGGPSGADKPMIIELAVAAMEELVRMAQMGEPLWMTTLDGTTTVLNEDEYIRSFPRGMGPKPAGFKCEASRETTVVIMNHISLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPTPLVPTRESYFVRYCKQHGEGTWAVVDVSLDNLCPSPSVRCRRRPSGCLIHEMPNGYSKVTWVEHVEVDDRGVHDLYKQLVSSGHAFGAKRWVATLDRQCERLASSMATNSPMGDVGVITNQEGRKSMLKLAERMVMSFCSGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPNRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGQDTGNCVSLLRVNSANSSQSNMLILQESCRDTTGSFVVYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDASTTATTGHNNGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSCEAP 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0958 758 SUPERFAMILY Homeodomain-like 84 151 IPR009057 -
Lele10g0958 758 CDD homeodomain 95 153 IPR001356 GO:0003677
Lele10g0958 758 MobiDBLite consensus disorder prediction 49 103 - -
Lele10g0958 758 Gene3D - 80 169 - -
Lele10g0958 758 FunFam Homeobox-leucine zipper protein GLABRA 2 282 501 - -
Lele10g0958 758 Pfam START domain 283 502 IPR002913 GO:0008289
Lele10g0958 758 ProSiteProfiles 'Homeobox' domain profile. 92 152 IPR001356 GO:0003677
Lele10g0958 758 Pfam Homeodomain 95 150 IPR001356 GO:0003677
Lele10g0958 758 ProSitePatterns 'Homeobox' domain signature. 127 150 IPR017970 GO:0000981|GO:0006355
Lele10g0958 758 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 93 753 IPR042160 -
Lele10g0958 758 SUPERFAMILY Bet v1-like 275 504 - -
Lele10g0958 758 FunFam Homeobox-leucine zipper protein HDG1 80 168 - -
Lele10g0958 758 ProSiteProfiles START domain profile. 273 505 IPR002913 GO:0008289
Lele10g0958 758 SUPERFAMILY Bet v1-like 521 750 - -
Lele10g0958 758 Coils Coil 151 178 - -
Lele10g0958 758 SMART HOX_1 93 156 IPR001356 GO:0003677
Lele10g0958 758 CDD START_ArGLABRA2_like 277 501 - -
Lele10g0958 758 Gene3D - 330 499 IPR023393 -
Lele10g0958 758 SMART START_1 282 502 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0958 Lele-ChrLele10 20799875 20803948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0958 35 756 Homeobox Transcription Factor Family AT1G05230 77.793 0.0 1148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele10g0958 START 4.7e-59 CL0209