Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0947 ATGGAGACCATTTGCCCAATAGACTCGCGGTGTGCCAATGAAATTGCAGCACTTCTCAGTCCTCCGTCACCTCTTCAAGTTCAGGCAATATCTTTAGACTCTTCTTATCTCACCAAGCTCTCTGTTTTTCATTTCTGCTCAGAATATTATCACAAGCTTTTATCTACAAAGAAGTGCAGTAGTATCATAGACAAGCAGGATGGAAATTTTGGAAAGGTTGTGTATGCAGCTGAGGACTTCCCTGAAGGAGAGCTTGTTCTGAAAGATCAAATGCTAGTTGGGATTCAATACTCTTCCAATAAGGAGGCTTTACTTGCAAGAATTAGGGGTTCTGAGAGCCATGATTGTGATGGGAGTGCCTCTTCAAACATCTCAAAATACAACAATGACACAGATTCATCTGATGGAGAAGACAATTCATATAAAAGAAAGGAGGATGGTGCTTGGGAATGTAGTTTTGGCGGTTCTGAGGCTAAAGTTCATCTCCCTGAAGGTGTTGTTCAATCATTAATGAACGGCCATTTGATGCTGCCTTACACTAAGGAGTTCTCCTTGCCACCAGCTGTTTCATGTCCTGGTGGATGTCGAGAGCCATTCTACTGCAGCACATCATGTGCAGAGGCTGATTGGGAATCTTGTCATTCTTTGATTTGTACTGGTGAGAGGTACCATAAGTTAAAAGAAAGCTGTCTTTTAGAGAAGGGTAAACAGGATACATCACATCTTTCAAACCATTATGATCTCACTACTCTTTTGGAGGCTTGGAGACCTATAGCAATGGGACACAAGAGAAGGTGGTGGGACTGCATTGCATTGCCAGATGATATTAATTTTTCCGATGAAGTTGCATTCAGGATGCAAATAAGATTTGACATTCGAGGAACTGCATTTTTTCCATTGCAAAGCTGCATGAACCATTCCTGCGGTCCTAATGCAAATGCGTTCAAAAGAGAGGAGGATAGAGATGGTCAAGCAACGATAATTGCACTGAGGTCCATTCGTAAAGGAGAAGAGATAACCATCTCATATGTTAACGAGGATCTTCCATATGGTTTCAGATGTAGGTGCCCAAAGTGCGTCGAAGAACAACCATAG 1095 0.421 METICPIDSRCANEIAALLSPPSPLQVQAISLDSSYLTKLSVFHFCSEYYHKLLSTKKCSSIIDKQDGNFGKVVYAAEDFPEGELVLKDQMLVGIQYSSNKEALLARIRGSESHDCDGSASSNISKYNNDTDSSDGEDNSYKRKEDGAWECSFGGSEAKVHLPEGVVQSLMNGHLMLPYTKEFSLPPAVSCPGGCREPFYCSTSCAEADWESCHSLICTGERYHKLKESCLLEKGKQDTSHLSNHYDLTTLLEAWRPIAMGHKRRWWDCIALPDDINFSDEVAFRMQIRFDIRGTAFFPLQSCMNHSCGPNANAFKREEDRDGQATIIALRSIRKGEEITISYVNEDLPYGFRCRCPKCVEEQP 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0947 364 CDD SET_SMYD 283 359 - -
Lele10g0947 364 SUPERFAMILY SET domain 65 357 IPR046341 -
Lele10g0947 364 Gene3D - 150 220 - -
Lele10g0947 364 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 222 289 IPR044237 GO:0008168
Lele10g0947 364 MobiDBLite consensus disorder prediction 115 130 - -
Lele10g0947 364 SMART set_7 59 350 IPR001214 GO:0005515
Lele10g0947 364 MobiDBLite consensus disorder prediction 112 141 - -
Lele10g0947 364 Gene3D SET domain 275 363 IPR046341 -
Lele10g0947 364 ProSiteProfiles SET domain profile. 52 344 IPR001214 GO:0005515
Lele10g0947 364 Pfam SET domain 71 343 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0947 Lele-ChrLele10 20538947 20545464 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele10g0947 SET 5.6e-15 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0947 10 20538947 20545464 Lele30g0944 30 13093153 13093710 CCT
Lele10g0947 10 20538947 20545464 Lele32g0440 32 2785777 2786334 CCT
Lele10g0947 10 20538947 20545464 Lele10g0947 10 20538947 20545464 ECH