Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0944 ATGAGTATATATATGGATCCTGTACCTGTATGTGAGTTATGTGTATTAGTAAGAGCTGTGGTGTATTGCAATTGTGATTCTGCACGTCTTTGCTTGAATTGTGATGCTTATGTACACTCGGCAAACGCTTTGTCTCGCCGGCATCCTCGTTCGCTGGTATGTGATGAATGCCATTGCCAACCAGCGATTGCACACTGCATGGATGATAAAATGTCTGTGTGTCAAAGTTGTGATTGTAATCGAAATGTCTGTTTGGGATTGGGACACAGGCGTCTTATGTTGCTTAGTTACACAGGTTGTCCATCTTTTGCTGACATGTGTAGGATCTGGCCTTTTGCTTTTGATTCTACCTCATCTCCTGGTTTAGCTCATAGTTGGGGATCGTTTAATTCTTTGCCTAAGAATGAAAACCAGTGTTTGGCTCATCAGCTTGATGATCACAATAATGATGCATCCTTTTCCGGCAAGTTTAGTGAACTTGAATGTTGTGCAAAGTATGAAAATAAGATGGCTCAATCTTCTCTCCTTCAACCAAATCCTAATTTCATTCCCTATTGCAGAGATCAACCAGTTTTATTCCCTGAAGCCTCTAAACTCCTTCCAAAGGGATGTCATGATTCTAAGGAGATTGGAATTTCTGAGGCTGATGATTTCTCTCAAGACGTTGCGGATTACCAGCTTGATGAAGGAGGATTGGATTGTCTATTAATGGAAAAAAACATTTCAGTTACAGAATTTAATGACCTTATTCAGAATGCCATGGAGGGGACCAACAACAGCAACAACAATGCAAACGGTGTACTCATGAATAATAATAATAATACGAGCTGCAACAACAGAAAAATGAATCATCATCATCAGCTGGGATTTCCTCATCAGGGTCAAGTTCATTCAAGCATACCACTTTCATTACCCGCCATCAATTTTGATAGTGACACTACCACTACGGATTTTCAGGATTGTGCCACTTGTGAATTTCAAGACTGTGGATTATCAGCAGCACTTTTGACAGTTGATACAACACCATGGGAAACAAATTTAGGGTATACATGCCCTCAAGCAAGGGAGAAAGCTAAGTTGAGATGCATTGAGAAAAAGAAGACTCGAACGTTTAGTAAACAAATAAGATATGCGTCTCGCCAAGCAAGAGCTGATACTAGAAAACGTGTAAAAGGTAGATTTGTGAAAGCAGAAGAAGAATATGATTTTGATCCTGATCTTGTGAGATATGAAGGGGAATCAGAGCATTAG 1251 0.3989 MSIYMDPVPVCELCVLVRAVVYCNCDSARLCLNCDAYVHSANALSRRHPRSLVCDECHCQPAIAHCMDDKMSVCQSCDCNRNVCLGLGHRRLMLLSYTGCPSFADMCRIWPFAFDSTSSPGLAHSWGSFNSLPKNENQCLAHQLDDHNNDASFSGKFSELECCAKYENKMAQSSLLQPNPNFIPYCRDQPVLFPEASKLLPKGCHDSKEIGISEADDFSQDVADYQLDEGGLDCLLMEKNISVTEFNDLIQNAMEGTNNSNNNANGVLMNNNNNTSCNNRKMNHHHQLGFPHQGQVHSSIPLSLPAINFDSDTTTTDFQDCATCEFQDCGLSAALLTVDTTPWETNLGYTCPQAREKAKLRCIEKKKTRTFSKQIRYASRQARADTRKRVKGRFVKAEEEYDFDPDLVRYEGESEH 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0944 416 Pfam CCT motif 355 397 IPR010402 GO:0005515
Lele10g0944 416 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 10 400 - -
Lele10g0944 416 SMART bboxneu5 6 53 IPR000315 GO:0008270
Lele10g0944 416 CDD Bbox1_BBX-like 10 53 - -
Lele10g0944 416 ProSiteProfiles CCT domain profile. 355 397 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0944 Lele-ChrLele10 20450550 20452771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0944 9 405 C2C2-CO-like Transcription Factor Family AT3G21880 36.098 4.92e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele10g0944 CCT 5.8e-14 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0944 10 20450550 20452771 Lele10g0944 10 20450550 20452771 ECH