Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0930 ATGGATCATAACTTTGTTTCTCCCTGTTCTGCCGCCGATGACGCCTCCTCCTCATCCTCCTTGGACCCATTGTTTTCCGGCTTCAGCCTTCAGTCCATTCTCAGCCTCCACCCCTCCGTCTTCTCTGACTATGCCGCCGGCAATGGCCTCCCCAGTCTCGCATTCTTATCCGATGATTCCCTGTCCCTGAATCTCCAGGGTGAAGCCACCCAGGGCTTCAGCACTTATGAGGACCATATTGCAGAGACTCCAGAGAAGAAGCCGACTATCTTGCCCAAATCTGACTCAGGTCTCTTCGAGTTCGTTGCAAGCTCTGGTAGCACTACTACTCCCCCCTTCGACTTCTTCTCCGGTCACTGCCCTCCCAGCTTCTACGATTCCTCAAACTTCAACCTTCTCCCTCAACTCCATTCCGTCGAGTCCTTTTCTCACAAGCGTCCCCGCTTCGACTCTCTCATTTCCACTCTCAACACCGTGCCCGCGCCGCCGCAGCACAACCCTGATCCTTCCACCGTCTTCAGCAACAACCTCTTGGCCAACACAAAACCAGCCTCTTCTTCGCTGGATGTTCCTCCCGTGGGTGAAAAATCATCTCCGGTGATTCCTCAAAGCAACCTGGCACGTCAGCGACGGCAGAAGCTCAGCGACAAGACTCGGTGCTTGCAGAAATTGATGCCGTGGGACAAGAAAATGGACCAAGCCACGCTGCTGGAGGAAGCGTACAAGTACGTCAAATTTCTGCAGGCGCAGTTCAATGTTCTCCAATCCATGCCCTCCTATTCGCCTTTCCTGTCCCACTCTGGTGCTTCGCATTCCCAATCCTCCGTTCAAAAAGGCGACGTGTTTGGGGATTTGGAGAGGCTGAACCGCAACCAGGTGTTGCAGGTGCTGGTGAACTCGCCCGTCGCCCAAACAAGGCTTTACTCCCAAGGCTTCTGTGTGTTCACCGTTGAACAGTTAACTTTGCTGAACAACATGGCAGGGAAGAGGCTTCTTCTGCCGCAGATTATGTCCGATAACGCTTCTTCAAAATCCTTCTTTAAGTGA 1047 0.532 MDHNFVSPCSAADDASSSSSLDPLFSGFSLQSILSLHPSVFSDYAAGNGLPSLAFLSDDSLSLNLQGEATQGFSTYEDHIAETPEKKPTILPKSDSGLFEFVASSGSTTTPPFDFFSGHCPPSFYDSSNFNLLPQLHSVESFSHKRPRFDSLISTLNTVPAPPQHNPDPSTVFSNNLLANTKPASSSLDVPPVGEKSSPVIPQSNLARQRRQKLSDKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFNVLQSMPSYSPFLSHSGASHSQSSVQKGDVFGDLERLNRNQVLQVLVNSPVAQTRLYSQGFCVFTVEQLTLLNNMAGKRLLLPQIMSDNASSKSFFK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0930 348 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 198 247 IPR011598 GO:0046983
Lele10g0930 348 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 200 259 IPR036638 GO:0046983
Lele10g0930 348 SMART finulus 204 253 IPR011598 GO:0046983
Lele10g0930 348 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 179 324 IPR045843 GO:0003700|GO:0006355
Lele10g0930 348 Gene3D - 202 259 IPR036638 GO:0046983
Lele10g0930 348 Pfam Helix-loop-helix DNA-binding domain 208 248 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0930 Lele-ChrLele10 20306975 20308021 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0930 210 327 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 44.915 2.29e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele10g0930 HLH 0.00029 No_clan