Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0920 ATGCAGAAATTAGAGAAAGCTCATGCTAAAGGGGATGGATCTAAGTCCCTGGCAGAGAAGCTGGCGAGATGGAAAGAATATAATACCCAGATTGATTCTTGCAACGATGCTGATAAGCCTATTCGGAAAGTTCCTGCCAAAGGATCAAAGAAGGGATGCATGAAAGGCAAAGGAGGGCCTGAGAATTCTCGTTGTAACTACAGGGGCGTCAGGCAGAGGACATGGGGCAAGTGGGTAGCCGAAATTCGAGAGCCGAACAGGGGAAGTAGGCTCTGGTTGGGTACATTTCCTACTGCCATTGGAGCTGCTCTTGCCTATGATGAAGCAGCAAGAGCAATGTATGGTTCTTTCGCTCGCCTCAACTTTCCCAATGTTTCTGTCTCCAATTTCTCTAATGAATCTTCAAGAGATTCACTAGTTACAACTCAATCTGATTCTGCAGTGCCAACTGAATCTTTGATGTCCCCAACCAACTCGGGCTTTTATGAGTTAGATAATCATAATACCGACAAGAAACCTGTTCCCTTGAATGTAAAAGTTGAGGAAGAGGAAGTTGAACTGAGGATCAATTCCTCTTCGCTTTCATGA 588 0.449 MQKLEKAHAKGDGSKSLAEKLARWKEYNTQIDSCNDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAALAYDEAARAMYGSFARLNFPNVSVSNFSNESSRDSLVTTQSDSAVPTESLMSPTNSGFYELDNHNTDKKPVPLNVKVEEEEVELRINSSSLS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0920 195 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Lele10g0920 195 Gene3D AP2/ERF domain 66 125 IPR036955 GO:0003700|GO:0006355
Lele10g0920 195 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Lele10g0920 195 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Lele10g0920 195 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Lele10g0920 195 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 155 - -
Lele10g0920 195 CDD AP2 65 125 IPR001471 GO:0003700|GO:0006355
Lele10g0920 195 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Lele10g0920 195 MobiDBLite consensus disorder prediction 38 61 - -
Lele10g0920 195 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Lele10g0920 195 MobiDBLite consensus disorder prediction 131 164 - -
Lele10g0920 195 MobiDBLite consensus disorder prediction 131 175 - -
Lele10g0920 195 SUPERFAMILY DNA-binding domain 66 123 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0920 Lele-ChrLele10 20157583 20158170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0920 10 123 AP2-EREBP Transcription Factor Family AT2G40350 65.254 3.86e-51 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele10g0920 AP2 2e-14 CL0081