Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0919 ATGGTGAGAACATCTTCGTACGACAAGAGTGGACTTAAAAAAGGGACATGGACCCCCGAGGAAGACAGGAAGCTAATTGCTTATGTTACTAGGTATGGCAGCTGGAATTGGCGCCAACTCCCCAGGTTTGCAGGACTGGCGAGGTGTGGAAAGAGTTGTAGACTGAGGTGGATGAATTATCTGAGACCCAACATCAAAAGAGGCAATTACACTCCTGAAGAAGAAGAACTTGTTATTAAACTTCACAAAGAACTGGGCAATAGATGGTCGGCGATTGCAGCTCATTTGCCGGGAAGAACTGATAACGAAATAAAGAACCACTGGCACACCACTCTTAAGAAGCGATCTCAACACAACTCGAGCGAACCCCATAGATCTAAAACGTCAAAAGATGATACTTCGTCCCCTAGCAAACAACACAGCGGTTCTTCTTCTTCTTCTCAGTCATATGATTCTTCCACGTCCCAGATCGAAATCCTGGATTCTAGCCCATTGTCTCCACAGTCACCCTCCACCAGCTGCATATTGTCTTCTGAAAATTCAAGTCTGCAAGATGATGACTTATCTTTTCTTGATGCTTTCACTGAGCCTGCAGAGACGACCCAGGATTTCTGTAGCCACTTAAATTTTGACGACGTGTTTTACGATAATCCAACAGAAACAATAATGCCAGTACAAAATCCTCTTCAAACTCCATCTGTTATTCCTCATTCAACGTTTGTGGAGGATGATTTTGCTTTCTTGAATTCACTTTCCCCGCAACCATTTGAGAGTTTTCTGATGGAGACACAAATGGCTGACGTGTCGTCTTTCCATCCGACAGAGTCACAAGCACCATTGGGAGCTCAATTAGAATATGTTTATCCACTTTATGATCTGGATCTCTGGAGTCAAAACAGTAATTTGTATGTATGA 915 0.4328 MVRTSSYDKSGLKKGTWTPEEDRKLIAYVTRYGSWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIKRGNYTPEEEELVIKLHKELGNRWSAIAAHLPGRTDNEIKNHWHTTLKKRSQHNSSEPHRSKTSKDDTSSPSKQHSGSSSSSQSYDSSTSQIEILDSSPLSPQSPSTSCILSSENSSLQDDDLSFLDAFTEPAETTQDFCSHLNFDDVFYDNPTETIMPVQNPLQTPSVIPHSTFVEDDFAFLNSLSPQPFESFLMETQMADVSSFHPTESQAPLGAQLEYVYPLYDLDLWSQNSNLYV 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0919 304 SMART sant 13 63 IPR001005 -
Lele10g0919 304 SMART sant 66 114 IPR001005 -
Lele10g0919 304 FunFam MYB-related transcription factor 13 66 - -
Lele10g0919 304 Gene3D - 69 143 - -
Lele10g0919 304 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele10g0919 304 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele10g0919 304 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele10g0919 304 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele10g0919 304 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele10g0919 304 MobiDBLite consensus disorder prediction 112 134 - -
Lele10g0919 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele10g0919 304 MobiDBLite consensus disorder prediction 112 179 - -
Lele10g0919 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele10g0919 304 CDD SANT 16 61 IPR001005 -
Lele10g0919 304 MobiDBLite consensus disorder prediction 135 179 - -
Lele10g0919 304 CDD SANT 69 112 IPR001005 -
Lele10g0919 304 Gene3D - 6 67 - -
Lele10g0919 304 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0919 Lele-ChrLele10 19989775 19990987 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0919 1 119 MYB Transcription Factor Family AT2G31180 68.067 3.22e-56 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0919 Myb_DNA-binding 1.7e-12 CL0123