Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0902 ATGGCCATGATACTTCGAGCGTTGCTTTTTCTGGGATTTTTGTCGGTTCAGATTCATTTGGTCTTCTCTTTCACTGATCCTCAAGATGTTGCTATATTGAGATCTTTAAAGGATATGTGGCAAAACACACCACCCAGTTGGGATAAGTCAGATGACCCTTGTGGAGCACCTTGGGAAGGAGTCACGTGCAACAGATCCAGAGTCACTTCACTGGGATTGTCAACTATGGGCCTCCAAGGCAAACTAAGCGGAGACATTGGAGGTCTCACTGAATTGAGATCCCTGGACTTGTCGTTTAACAGAGGTTTGAAGGGTCCTGTGTCTCCACAATTAGGAGACCTAAGAAATCTAAATATATTGATTTTGGCTGGTTGCACCTTCAGTGGTAAAATTCCAAATGAATTTGGAAATCTCTCGGAACTATCTTTCTTGGCATTAAATTCAAATAACTTGTCTGGAAAAATACCATCTTCATTGGGTAACCTTTCCAAATTATATTGGTTGGATTTAGCAGACAATCAATTAACAGGGTCAATTCCTGTATCTACTTCTACATCTCCTGGATTAGACATGCTTTTAAAGGCTAAGCACTTCCATTTCAACAAGAACCAGCTTTCAGGTCCTATTCCACCAAACCTTTTCAGCTCTGAGATGGTACTCATCCATGTGTTGTTTGATGGGAATCGTTTAACAGGCACAATTCCATCAACATTAGGATTAGTTCAAACGCTTGAAGTTCTTCGGCTTGATCGAAATTTCTTGACCGGAGAAGTCCCATCAAATCTCAACAATCTAACCAACCTCAATGAAATGAATCTGGGACATAATAAATTGAAAGGTTCTTTACCAGATTTGTCTCAGATGGACACCCTCAATTACGTGGATCTGAGTAACAATTCTTTTGATCCTTCTCAACCCCCAATATGGTTCAATACTTTACCATCGCTTACCACTTTAGTTATGGAGTTTGGATCACTTGAAGGTCCTTTGCCATCAAAACTGTTCAGCAGTCCCCAAATACAACAAGTGAAATTAAAGCACAATGCATTGAACAACACTTTGGACATGGGTGACAGCATTAGCCCTCAATTACAGCTCTTAGATTTACAAGACAACCAGATTACTTCAGTAACGCTCAGTTCTGGATACAAAAATACATTGATTTTGATTGGAAATCCAGTGTGCCTTACTGCTCTCTCAAATACCAGTTACTGTCAACTACAACAACAACCCAAAAAACCTTACTCTACCAGCTTGGCTAATTGTGGAAGCAAATCTTGTCCTGCTGATCAGAAGTTAAGCCCACAAAGTTGTGAATGTGCCTACCCATATGTAGGAATTTTATATTTCAGAGGACCCTTGTTTAGAGAATTATCAAATGCAAATACATTTCATTCTCTTGAGATGAGCTTGTGGGTGAAGTTGGGCCTCACTCCTGGTTCAGTATCTTTACAGAACCCATTTTTCAACAGTGATGATTATCTTCAAGTACAATTAGCACTCTTCCCACCAACAGGAACATACTTCAATAGGTTAGATATTCAGAAAATTGGATTTCAATTAAGTAATCAAACTTACAAGCCACCACCAGAGTTTGGACCATATTACTTCATCGCATTTCCATATGCTTTCCCAGAATCCCAAGGAGCAACTTCTCTAAGAAAGCCCGTTATAATTGGGATAGCAATTGGCTGCTCATTTCTGGTTTTGAGCTTCGTAGGGCTGGGGATATATGCCATTATACAAAAGAAACGTGCAGAGAAAGCAATTGTGCTAAGCAGGCCTTTTGCATCATGGACTCCTAGTGGGAAGGATAGTGGGGGAGCTCCACAACTAAAAGGAGCAAGATGGTTCTCTTATGATGAGCTCAAAAAGTGCACCTCAAATTTCTCCCATAACAATGAGTTAGGATTTGGTGGTTATGGAAAGGTGTACAAAGGGGTGCTTCCTGATGGACAAATGGTTGCAATAAAACGAGCCCAACAAGGATCAATTCAAGGAGGACTTGAGTTCAAGACTGAAATTGAATTGCTTTCACGAGTTCATCACAAGAATCTTGTTGCTCTTGTAGGCTTCTGCTTTGAACAAGGAGAGCAAATGTTGGTCTATGAATATATGCCCAATGGAACACTCAGGGATTGTTTATCTGGGAGATGTGGGATTTATCTAGACTGGAAGAGGAGGTTGAGAATTGCTCTTGGGTCAGCAAGAGGACTTGCATACTTACATGAACTTGCTAACCCTCCCATAATTCATAGAGATGTCAAGTCCTCTAATATCTTGCTAGATGAGAATTTGATAGCAAAAGTTGCAGATTTTGGCTTGTCAAAGTTAGCATCAGATGGTGGAAAAGGCCATGTTTCTACTCAGGTTAAAGGCACATTGGGATATCTTGATCCTGAATATTACATGACACAACAATTGACCGAGAAGAGTGATGTGTATAGTTTTGGTGTCGTGATGCTTGAACTCATAACTGCGAGGCAACCTATTGAGAAAGGAAAGTACATTGTGCGTGAAGTGAGATCACTGATAAACAAGAATGAGAATGAGCAAGAGTATTGTGGTTTAAGGGAACTCATGGATCCAGTGGTTATAGAAACTTGTAACCTTGGAGGGTTTCGTACATTATTGGATCTCACAATGCAATGTGTTGAGGAATCAGCTTCTGATCGTCCAACAATGAGTGAAGTTGTGAAAGATCTTGAAATCGTTCTGCAAAATGATGGCTTGAACACAAATTCCACTTCTGCTTCCTCTTCTGCAACAGACTTTGCACTTTCTAAGACTTCTCTCGCACATCCTTACATGGATACTTTTAGCAGAAAGGACGTTAATGAGACCAATGCCTTTCACTGTAGTGGTGGCTACACACTTCCTGCAAAAATCGAGCCCAAATAG 2901 0.4043 MAMILRALLFLGFLSVQIHLVFSFTDPQDVAILRSLKDMWQNTPPSWDKSDDPCGAPWEGVTCNRSRVTSLGLSTMGLQGKLSGDIGGLTELRSLDLSFNRGLKGPVSPQLGDLRNLNILILAGCTFSGKIPNEFGNLSELSFLALNSNNLSGKIPSSLGNLSKLYWLDLADNQLTGSIPVSTSTSPGLDMLLKAKHFHFNKNQLSGPIPPNLFSSEMVLIHVLFDGNRLTGTIPSTLGLVQTLEVLRLDRNFLTGEVPSNLNNLTNLNEMNLGHNKLKGSLPDLSQMDTLNYVDLSNNSFDPSQPPIWFNTLPSLTTLVMEFGSLEGPLPSKLFSSPQIQQVKLKHNALNNTLDMGDSISPQLQLLDLQDNQITSVTLSSGYKNTLILIGNPVCLTALSNTSYCQLQQQPKKPYSTSLANCGSKSCPADQKLSPQSCECAYPYVGILYFRGPLFRELSNANTFHSLEMSLWVKLGLTPGSVSLQNPFFNSDDYLQVQLALFPPTGTYFNRLDIQKIGFQLSNQTYKPPPEFGPYYFIAFPYAFPESQGATSLRKPVIIGIAIGCSFLVLSFVGLGIYAIIQKKRAEKAIVLSRPFASWTPSGKDSGGAPQLKGARWFSYDELKKCTSNFSHNNELGFGGYGKVYKGVLPDGQMVAIKRAQQGSIQGGLEFKTEIELLSRVHHKNLVALVGFCFEQGEQMLVYEYMPNGTLRDCLSGRCGIYLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSSNILLDENLIAKVADFGLSKLASDGGKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITARQPIEKGKYIVREVRSLINKNENEQEYCGLRELMDPVVIETCNLGGFRTLLDLTMQCVEESASDRPTMSEVVKDLEIVLQNDGLNTNSTSASSSATDFALSKTSLAHPYMDTFSRKDVNETNAFHCSGGYTLPAKIEPK 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0902 966 CDD STKc_IRAK 636 903 - -
Lele10g0902 966 SUPERFAMILY Protein kinase-like (PK-like) 615 922 IPR011009 -
Lele10g0902 966 SUPERFAMILY L domain-like 45 402 - -
Lele10g0902 966 Gene3D Phosphorylase Kinase; domain 1 604 705 - -
Lele10g0902 966 SMART serkin_6 630 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0902 966 Gene3D Ribonuclease Inhibitor 185 284 IPR032675 -
Lele10g0902 966 Gene3D Transferase(Phosphotransferase) domain 1 706 926 - -
Lele10g0902 966 Gene3D Ribonuclease Inhibitor 285 432 IPR032675 -
Lele10g0902 966 FunFam Predicted protein 187 408 - -
Lele10g0902 966 ProSiteProfiles Protein kinase domain profile. 630 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0902 966 FunFam Leucine-rich repeat family protein 28 184 - -
Lele10g0902 966 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 706 918 - -
Lele10g0902 966 PANTHER RECEPTOR-LIKE PROTEIN 55 34 906 - -
Lele10g0902 966 ProSiteProfiles Leucine-rich repeat profile. 363 384 IPR001611 GO:0005515
Lele10g0902 966 Gene3D Ribonuclease Inhibitor 29 184 IPR032675 -
Lele10g0902 966 Pfam Protein tyrosine and serine/threonine kinase 633 902 IPR001245 GO:0004672|GO:0006468
Lele10g0902 966 ProSitePatterns Protein kinases ATP-binding region signature. 636 658 IPR017441 GO:0005524
Lele10g0902 966 FunFam Leucine-rich repeat protein kinase family protein 598 705 - -
Lele10g0902 966 Pfam Leucine rich repeat N-terminal domain 27 64 IPR013210 -
Lele10g0902 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 750 762 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0902 Lele-ChrLele10 13352273 13359769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0902 20 966 Receptor kinase-like Gene Family AT1G79620 71.166 0.0 1410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Lele10g0902 PK_Tyr_Ser-Thr 2.8e-47 CL0016