Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0883 ATGGCTTTTCTTCTTAACCCCAGCTTCTGCCGCCACCTGTTATTAATTTTCTTGCACTTTCTTTCTTCTTTTCTCATCATCAATTCACTTTCCAGTACTGTTTCCATTTCTGTAACTCCTAACCACACATTAATCTGTGCCTTGCAGAGCACCGACCGGCTCCAAGGACAGAAAGCATTCCTCAACTGTACCAGTTTACCCACTGGCATTCAAATTCATGTGAACCCCAACATTTCCTTCTCTGAGATTGCAGGAGGAAATGGGTTTGTCTGTGCACTGAGGCCACCGGTGCGTTCTCCTTCTCCTTCTTCTGTCATGTTTTGTTGGAGATACTCTACCAATGCGACAAATGTCGTCCCCAAGCGCATATACCGTGGGCCTATGATTCAAAATTTGGAAGCAGGAAACTCCCAAGTTTGTGGCCTTTCAAGCCCCAACAATCGCCTTAACTGCTGGCAATGGCCTGAGTTCAACACAAGTATTGTGAAAAGCTTCTCGAGCATATCTTTGGGAGAGAATTTCGTGTGTGGATTATTGGAAACATCTGGGAATATTAATTGCCTAGGAAATAATAGCATTGTTGGAGATGAACCCATGGGGAATTACTCTGTGATTGCTGCAGGGACGAGACATGCTTGTGCTATCTCCTCCATTAATGGAAGCTTGCATTGTTGGGGTGACGTACCAGGAGCCACAATAACGCCTCAAGGAAGATTCATCTCTTTGGCTTTGGGAGATAATCGAAGTTGTGCTTTGAGGGCTGTGAACCGAACAGTTGATTGCTGGGGGACAGACAATTTCAGCATGCCAGAGAGCATGAGAAACACATATTTTCAAGCAATTACAGCTAAAGGAAGTGTTTTCTGTGGTTTGATGTCTGATGATTATTCTTTGCATTGTTGGGGAAATGATAAGTTGGGGATGAACGGGACAGCTCTTAAGGTGTTTGATAAGGTGCTACCTGGTCCTTGTAGAACTGAATGTCCATGTGGACCATTGCCAGGTTCTACACAGTTTTGTGATCTGGGTCAAACAATTTGCAGTTCTTGTGTTGAGAGCCAACAATCTGAATTCCAACCATCACCCCCGCCGCCACCGATGGGTGCTGCTTCCCCATCAAGGCAACGTGATTGGAGCAGCAAAATGGTGGCATTTCTAGTGGTTGGTTGTGTTGGTTCACTTTCTTTGATGCTAGTCTTGGCATTCTTTCTCTTCAGGTACTGCCAAGACCGAGGATGCCGGCGTGTCCACGACTCTGGCCGGTTGGATGAGCCAGAAGATCAACCGGCAATCCAACCAACTTTAGAGAAGAGATTGAGCCATATGATTAGCATGGGAAATGGAGGCCACTTAGAGGAATTTTCTTTGCAAATACTATTGGAATTAACCAACAATTTCTCAGAATATAAAAGAATAGGAACAGGGAGTTTTGGTTCAGTCTACCATGCCACACTGAAAGATGGTAGAGAAGTCGCCATTAAAAGAGCCGAGATCTCATGCACCTCCCCATCATACAAAATCCTAGGAGGCTCCAAGCGTCAAGAAGACAAAGACAACGCGTTTGTGAATGAACTCGAATCTTTATCGAGACTCAACCATAAGAACCTGGTGAGATTACTGGGTTTCTTTGAGGACAAGGATGAGAGAATTCTAGTCTACGAGTTTATGAACAACGGTAGCCTAACCGACCACCTTCACAAGTTCCATGCTTCAACTTCAAATTCTCCTCTCATGTCATGGTTAGGACGCATCCAAGTAGCTTTAGATGCAGCCAGAGGCATAGAATACCTGCATGAGTATGCAATTCCACCGATCATTCATCGTGATATCAAATCAGCAAACATACTATTAGACGCAAAATGGACCGCCAAAGTATCAGATTTTGGACTCTCCCTAATGGGTCCTGAAGATGAAGAGTCTCATCTTTCTCTTCTAGCTGCAGGCACCGTAGGGTACATGGATCCAGAGTATTACAGGCTGCAACACCTGACCACAAAGAGCGATGTGTACAGTTTTGGTGTTGTTCTGCTTGAAATGCTTTGTGGGTATAAAGCGATACACCGGAACGAGAATGGGACGCCCAGGAATGTGGTGGATTTTCTGGTGCCATACATTGTGCAGGATGAGATTCATAGAGTTTTGGATCGGAGGTTGCCACCACCAACACCGTATGAGATAGAGGCAGTGACATTTGTGGGATATTTGGCTGCAGATTGTGTGAGTTTAGAAGGACGTGATAGGCCTACAATGACAAATGTTGTAAATAGGTTGGAATCAGCAGTGGATGCTTGTTTAGCACAACCAAAACCAACACTTTCTCGCTTTAACTCTGCTTCTGATTCAAATTAG 2349 0.447 MAFLLNPSFCRHLLLIFLHFLSSFLIINSLSSTVSISVTPNHTLICALQSTDRLQGQKAFLNCTSLPTGIQIHVNPNISFSEIAGGNGFVCALRPPVRSPSPSSVMFCWRYSTNATNVVPKRIYRGPMIQNLEAGNSQVCGLSSPNNRLNCWQWPEFNTSIVKSFSSISLGENFVCGLLETSGNINCLGNNSIVGDEPMGNYSVIAAGTRHACAISSINGSLHCWGDVPGATITPQGRFISLALGDNRSCALRAVNRTVDCWGTDNFSMPESMRNTYFQAITAKGSVFCGLMSDDYSLHCWGNDKLGMNGTALKVFDKVLPGPCRTECPCGPLPGSTQFCDLGQTICSSCVESQQSEFQPSPPPPPMGAASPSRQRDWSSKMVAFLVVGCVGSLSLMLVLAFFLFRYCQDRGCRRVHDSGRLDEPEDQPAIQPTLEKRLSHMISMGNGGHLEEFSLQILLELTNNFSEYKRIGTGSFGSVYHATLKDGREVAIKRAEISCTSPSYKILGGSKRQEDKDNAFVNELESLSRLNHKNLVRLLGFFEDKDERILVYEFMNNGSLTDHLHKFHASTSNSPLMSWLGRIQVALDAARGIEYLHEYAIPPIIHRDIKSANILLDAKWTAKVSDFGLSLMGPEDEESHLSLLAAGTVGYMDPEYYRLQHLTTKSDVYSFGVVLLEMLCGYKAIHRNENGTPRNVVDFLVPYIVQDEIHRVLDRRLPPPTPYEIEAVTFVGYLAADCVSLEGRDRPTMTNVVNRLESAVDACLAQPKPTLSRFNSASDSN 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0883 782 SUPERFAMILY Protein kinase-like (PK-like) 443 757 IPR011009 -
Lele10g0883 782 SUPERFAMILY RCC1/BLIP-II 106 312 IPR009091 -
Lele10g0883 782 SMART serkin_6 466 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0883 782 Pfam Protein kinase domain 467 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0883 782 FunFam PTI1-like tyrosine-protein kinase 3 556 767 - -
Lele10g0883 782 ProSitePatterns Protein kinases ATP-binding region signature. 472 494 IPR017441 GO:0005524
Lele10g0883 782 ProSitePatterns Serine/Threonine protein kinases active-site signature. 605 617 IPR008271 GO:0004672|GO:0006468
Lele10g0883 782 Gene3D Transferase(Phosphotransferase) domain 1 556 769 - -
Lele10g0883 782 Gene3D Phosphorylase Kinase; domain 1 439 555 - -
Lele10g0883 782 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 197 767 IPR044815 GO:0004674
Lele10g0883 782 ProSiteProfiles Protein kinase domain profile. 466 761 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0883 782 CDD STKc_IRAK 472 758 - -
Lele10g0883 782 Gene3D - 198 324 IPR009091 -
Lele10g0883 782 Gene3D - 27 197 IPR009091 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0883 Lele-ChrLele10 11068592 11070940 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0883 32 777 Receptor kinase-like Gene Family AT5G47850 51.647 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Lele10g0883 Pkinase 2e-44 CL0016