Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0874 ATGGGACGTTCTCCTTGTTGCGATAAAGCCCACACAAACAAAGGCGCTTGGACAAAAGAAGAAGACCAACGCCTTATTGATTATATTCGCCTCCATGGCGAAGGCTCTTGGCGTTCTCTCCCTAAAGCTGCTGCCGAGTTGGACTTCAAGACCTCACCGGCGGCGGAAAACGATTTCGTCGTGAAGAAGCAGAAGCTGAGTGATAGTTTCAATTACATCGATTTCGGCAGGATTAAGGCGGTTGAGGAGTTGAACAACACTAGTAGTGGCACCACTACAGAGGAAGAAGAACCGCAATTGCTGGAGCGAGATTCTTCGCTTCATCGTGCTAGTGGTGAGCCCAATCTGGAGCTCTCGATTGGTCTCGTGCCGTTTAACTCCGAGTCGGCTCGTACAGTATCAGGGGAACTTGGCCGAGTCAAAAATTGGGTTGGTCCTATCGCCGGCAACGGCGGCTCAAACGGCGGCGCGTCGGAGTTGGCAATTCGATTTTTAGAGGTGGGGAAGTGTATAGGAACAAATAACCGCCACAACGCAAATCGATTCAGGAATAGATTTCAAACGCACTGCTGGCCATAG 579 0.506 MGRSPCCDKAHTNKGAWTKEEDQRLIDYIRLHGEGSWRSLPKAAAELDFKTSPAAENDFVVKKQKLSDSFNYIDFGRIKAVEELNNTSSGTTTEEEEPQLLERDSSLHRASGEPNLELSIGLVPFNSESARTVSGELGRVKNWVGPIAGNGGSNGGASELAIRFLEVGKCIGTNNRHNANRFRNRFQTHCWP 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0874 192 Pfam Myb-like DNA-binding domain 14 41 IPR001005 -
Lele10g0874 192 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 45 - -
Lele10g0874 192 ProSiteProfiles Myb-like domain profile. 9 42 IPR001005 -
Lele10g0874 192 Gene3D - 13 66 - -
Lele10g0874 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 39 IPR017930 -
Lele10g0874 192 SUPERFAMILY Homeodomain-like 9 43 IPR009057 -
Lele10g0874 192 CDD SANT 16 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0874 Lele-ChrLele10 8547586 8548679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0874 1 47 MYB Transcription Factor Family AT4G09460 85.106 1.10e-23 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele10g0874 Myb_DNA-binding 1.3e-07 CL0123