Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0872 ATGGAATCCTGCAACTGTATTGAGCCCCCACCAGGGGATGAATTGTTGATGAAGTACCAATATATTTCGGATTTCTTCATCGCCCTTGCTTATTTTTCAATCCCACTAGAACTGATTTACTTTGTAAAGAAATCAGCCGTATTTCCATATAGATGGGTACTTGTTCAGTTTGGTGCTTTCATAGTTCTATGTGGAGCAACACATCTAATAAATTTATGGACCTTCACAGTGCATTCAAAAACTGTGGCAGTAGTAATGACCACTGCTAAGGTTTTAACTGCTGTGGTATCATGTGCGACTGCCCTTTTGCTTGTACATATCATTCCTGATTTATTGAGTGTTAAGACCAGAGAGCTATTTTTGAAGAATAAGGCTGCAGAGCTTGATAGGGAAATGGGCTTGATTCGCACACAGGAAGAAACTGGTCGACATGTTAGGATGCTGACTCATGAGATTAGAAGCACTCTGGATCGACACACTATACTTAAAACAACTCTTGTTGAACTGGGTAGAACTTTGGCACTGGAGGAGTGTGCATTATGGATGCCAACACGTACTGGGTTGGAGCTCCAACTTTCCTACACATTGAGACAGCAAAACCCAGTTGGATATACGGTACCCATCCATCTTCCTGTGGTCAATCAAGTATTTAGTACCAACCGGGCTGTCAAAATTTCACCAAACTCCCCAGTAGCCAGATTACGGCCTCATGCTGGAAAATACATGCCTGGGGAAGTAGTTGCTGTTCGAGTGCCCCTCCTACATCTTTCTAATTTTCAAATTTATGATTGGCCAGCAGTTTCATCAAGCTATGCTTTGATGGTCTTGATGCTTCCATCAGATACTGCAAGACAGTGGCATCTCTATGAGTTAGAGCTGGTTGAGGTTGTTGCTGATCAGGTTGCTGTTGCTCTTTCACATGCTGTGATTTTAGAAGAGTCAATGAGGGCAAGGGATCAGCTCATGGAACAAAATGTTGCGCTTGATCTGGCAAGAAGAGAAGCAGAGACTGCAATTCGTGCTCGCAATGATTTTTTGGCTGTAATGAATCACGAGATGAGGACTCCTATGCATGCAATTATTGCACTATCCTCATTGTTACAAGAAACAGAGCTGACACCTGAGCAGCGGTTGATGGTTGAGACCATACTGAAAAGTAGTAATCTATTGGCTACTCTTATCAATGACGTTTTAGATCTTTCACGTCTAGAAGATGGCAGTCTTCAACTAGATGCAGCAACATTCAGCCTCCATTCTGTGTTCAGAGAGGTCCTTAGATTGATCAAACCTGTTGCATCTGTCAAAAAGTTGTCACTCACTTTAAATTTAGCTCCAGACTTGCCGGTGTATGCTATTGGTGATGAAAAACGCCTCATGCAAACTATTCTCAATGTTGTTGGTAATGCTGTTAAGTTCTCGAAAGAGGGTGGTGTCTCCATCACTGTTTCTGTTGCAAAAGTTGAATCCTTTAGGGATGCTAGATTTCCAGACTTTATACCAATGCTTAGTGATAGTCAATTTTATTTACGAGTACAGGTAAAAGATTCAGGATCAGGAATTAATCCACAAGATATACCTACATTATTTACTAAGTTTGCACAAACTCAATCTTCAACAGCAAGAAATTCTGGTGGAAATGGACTTGGCCTTGCAATTTGCAAGAGGTTTGTAAATCTTATGGAGGGGCATATTTGGATTGATAGTGAAGGTATTGGTAAGGGGTGTACAGCTACCTTTATTGTAAAACTTGGGATCCCTGATCGATCAAATGAATCTAAAGCCCCCTTTGTACATAAGGTTCTGGGAAATCACAGCCCCACAAACTTTGCAGGGCTCAAGGTTCTTGTCTTGGATGATAATGGGGTTAGCAAGACAGTAACGAAGGGACTACTTGTGCATTTAGGGTGTGATGTTACAACAGCAAGCTCAAGTGAAGAATGCTTGTTCGTTCTTTCTCATGAACACAAAATGATCTTCATGGACGTATGTTCAGGCATAGATGGTTATGATCTTGCAGTACGTATCCATGAGAAGTTTACCAAACGTCAAGATAGGCCTCTTATTGTTGCTCTTACTGGAAACACTAACAAGGTCACAAAAGAAAACTGTGTGAGGGTTGGAATGGATGGCCTCATATTGAAACCTGTTTCTGTTGATAAGATGAGAGGTGTTTTGTCTGAACTACTAGAGCACCGGGTTTTATTTGAAACCATTTAA 2217 0.4127 MESCNCIEPPPGDELLMKYQYISDFFIALAYFSIPLELIYFVKKSAVFPYRWVLVQFGAFIVLCGATHLINLWTFTVHSKTVAVVMTTAKVLTAVVSCATALLLVHIIPDLLSVKTRELFLKNKAAELDREMGLIRTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLALEECALWMPTRTGLELQLSYTLRQQNPVGYTVPIHLPVVNQVFSTNRAVKISPNSPVARLRPHAGKYMPGEVVAVRVPLLHLSNFQIYDWPAVSSSYALMVLMLPSDTARQWHLYELELVEVVADQVAVALSHAVILEESMRARDQLMEQNVALDLARREAETAIRARNDFLAVMNHEMRTPMHAIIALSSLLQETELTPEQRLMVETILKSSNLLATLINDVLDLSRLEDGSLQLDAATFSLHSVFREVLRLIKPVASVKKLSLTLNLAPDLPVYAIGDEKRLMQTILNVVGNAVKFSKEGGVSITVSVAKVESFRDARFPDFIPMLSDSQFYLRVQVKDSGSGINPQDIPTLFTKFAQTQSSTARNSGGNGLGLAICKRFVNLMEGHIWIDSEGIGKGCTATFIVKLGIPDRSNESKAPFVHKVLGNHSPTNFAGLKVLVLDDNGVSKTVTKGLLVHLGCDVTTASSSEECLFVLSHEHKMIFMDVCSGIDGYDLAVRIHEKFTKRQDRPLIVALTGNTNKVTKENCVRVGMDGLILKPVSVDKMRGVLSELLEHRVLFETI 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0872 738 SMART gaf_1 157 315 IPR003018 GO:0005515
Lele10g0872 738 Pfam His Kinase A (phospho-acceptor) domain 342 406 IPR003661 GO:0000155|GO:0007165
Lele10g0872 738 Gene3D - 607 738 - -
Lele10g0872 738 PIRSF Ethylen_sen_hybr_HK 1 736 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Lele10g0872 738 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 2 731 - -
Lele10g0872 738 CDD HisKA 339 402 IPR003661 GO:0000155|GO:0007165
Lele10g0872 738 Gene3D - 307 405 - -
Lele10g0872 738 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 395 583 IPR036890 -
Lele10g0872 738 CDD HATPase_EvgS-ArcB-TorS-like 458 583 - -
Lele10g0872 738 Gene3D - 135 306 IPR029016 -
Lele10g0872 738 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 327 407 IPR036097 GO:0000155|GO:0007165
Lele10g0872 738 Pfam GAF domain 157 305 IPR003018 GO:0005515
Lele10g0872 738 FunFam Ethylene receptor 606 738 - -
Lele10g0872 738 SMART REC_2 612 725 IPR001789 GO:0000160
Lele10g0872 738 SUPERFAMILY CheY-like 608 730 IPR011006 -
Lele10g0872 738 SMART HKATPase_4 453 585 IPR003594 -
Lele10g0872 738 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 453 583 IPR003594 -
Lele10g0872 738 FunFam Ethylene receptor 1 308 404 - -
Lele10g0872 738 FunFam Ethylene receptor 1 406 588 - -
Lele10g0872 738 SUPERFAMILY GAF domain-like 157 317 - -
Lele10g0872 738 ProSiteProfiles Response regulatory domain profile. 613 729 IPR001789 GO:0000160
Lele10g0872 738 FunFam Ethylene response sensor 135 306 - -
Lele10g0872 738 Pfam Response regulator receiver domain 614 722 IPR001789 GO:0000160
Lele10g0872 738 PRINTS Bacterial sensor protein C-terminal signature 509 523 IPR004358 GO:0016310|GO:0016772
Lele10g0872 738 PRINTS Bacterial sensor protein C-terminal signature 527 537 IPR004358 GO:0016310|GO:0016772
Lele10g0872 738 PRINTS Bacterial sensor protein C-terminal signature 544 562 IPR004358 GO:0016310|GO:0016772
Lele10g0872 738 Gene3D - 406 590 IPR036890 -
Lele10g0872 738 SMART HisKA_10 341 406 IPR003661 GO:0000155|GO:0007165
Lele10g0872 738 ProSiteProfiles Histidine kinase domain profile. 348 587 IPR005467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0872 Lele-ChrLele10 8203142 8219127 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0872 1 736 Miscellaneous Gene Families AT1G66340 80.946 0.0 1219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele10g0872 GAF 1.1e-14 CL0161