Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0864 ATGGGGAGAACATCAGAGAGTGAAGAAAGTGGTGGTTTGAAGAAGGGGCCATGGACAGCAGAAGAAGATAGAATACTTGTAGATTACATTGAGAAACATGGACACGGAAGCTGGAGAGCACTTCCAAAGCTGGCAGGATTGAACAGATGTGGAAAAAGTTGCCGGCTGAGGTGGACTAATTATCTAAGGCCAGACATCAAAAGAGGAAACTTCTCTGAGCAAGAAGAGCAACTCATCATCAATTTGCATGCAGTCCTTGGCAACAAGTGGTCCACTATAGCAGGTCATCTACCAGGGAGAACTGACAATGAAATAAAGAACTTTTGGAATACTCATTTGAAGAAGAAGCTCATGCAAATGGGGTTAGACCCAGTGACCCACCGTCCTAGATCTCATCAACTTAATCTTCTCTCCAATCTCCAACACTTACTATCTTCTCTCACAAAAATTAATAACCCTAATCCTCCTAATAATCATCATCATTGGGACAATATTCTTAATACTATTCGAACTTTGTCCCCTTCGCAACTAGCTAAACTCCATTTGCTACACAACTTACTTCAAGTCCTCACGACTACTACTACTGCTACTATGAGCCTGGCTCCAAGAAATCTCGAGCCACTTGTCGATCCCTCGATGATCGATCATCTTCTCTTACAAGAACATCAAACCGTTGGAAATTTTCCTTCTCTTTCAAATTTGTCAAATGTGGAGGGTCTTTATAATCATCATCATCAGCATCTACCACAAGCTGTAGTGAGTGATCATGATCAGCTTCTTAAGATAATGCCATGTTTGGTTGATCCGGCAGCATCGTCTTCGAGTTCGCTTCCCAATCTGGTTTTACCCACACCTGATTGCTCCCCATCATCACCATCTTTTAACAAAATGAAAGACAAGTTAAACCAAAATGATAGCACTAATATTAATCCTCCTTCTTCCACTTCCACATTAACCTTTGATACTTTGGGAGATTTTATGGGTGAGCAAGCAAGTGAAGATTACTGGAAAGATCTTATAGGGCAAGAATCTAACCAGCCATGGGCAATCTCATAA 1056 0.4129 MGRTSESEESGGLKKGPWTAEEDRILVDYIEKHGHGSWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGNFSEQEEQLIINLHAVLGNKWSTIAGHLPGRTDNEIKNFWNTHLKKKLMQMGLDPVTHRPRSHQLNLLSNLQHLLSSLTKINNPNPPNNHHHWDNILNTIRTLSPSQLAKLHLLHNLLQVLTTTTTATMSLAPRNLEPLVDPSMIDHLLLQEHQTVGNFPSLSNLSNVEGLYNHHHQHLPQAVVSDHDQLLKIMPCLVDPAASSSSSLPNLVLPTPDCSPSSPSFNKMKDKLNQNDSTNINPPSSTSTLTFDTLGDFMGEQASEDYWKDLIGQESNQPWAIS 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0864 351 FunFam MYB-related transcription factor 14 67 - -
Lele10g0864 351 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 220 - -
Lele10g0864 351 FunFam Transcription factor MYB39 70 131 - -
Lele10g0864 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 62 IPR017930 -
Lele10g0864 351 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lele10g0864 351 SMART sant 67 115 IPR001005 -
Lele10g0864 351 SMART sant 14 64 IPR001005 -
Lele10g0864 351 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lele10g0864 351 CDD SANT 17 62 IPR001005 -
Lele10g0864 351 Gene3D - 14 67 - -
Lele10g0864 351 Gene3D - 70 117 - -
Lele10g0864 351 MobiDBLite consensus disorder prediction 274 321 - -
Lele10g0864 351 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lele10g0864 351 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Lele10g0864 351 CDD SANT 70 113 IPR001005 -
Lele10g0864 351 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lele10g0864 351 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0864 Lele-ChrLele10 7714047 7716659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0864 1 348 MYB Transcription Factor Family AT3G02940 46.629 2.81e-89 269
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0864 Myb_DNA-binding 5.1e-16 CL0123