Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0858 ATGACAGGGCGAGCATCATCATCTACTTCTTCCGTTCACTATCATTGGACTTATGATGTTTTTATCAACTTTAGAGGTGAAGACACTCGCTATGGTTTCACAGGAAATCTGAATCATGCTCTCACTAGAAAGGGAGTTCGCACCTTCTTTGATGATAAAGAAATAAGAAAAGGGGACGAAATTACTCCAACACTTCTCAAAGCAATCCAAGAATCAAGAATGGCCATTATTGTATTTTCTCAGAACTATGCTTCTTCAACATTTTGCCTTGACGAACTTGTCCAGATCTATCAATGTATTAAGCAAAAGGGTCGGCTAGTTTGGCCAATTTTTTACGATGTTGAACCTTCAGAAGTGCGGCGTCAAAAAGGGAAGTATGGTCAAGCATTGTTTATGCATACAAATAACTTAAGGGCCAGTGAAGAGAAGATTCAAAGTTGGAAGCTCGCACTATATGAAGTATCTAATATTTCTGGAACACATTTCAATACTAGGCATGATTATGAATATGAGTTTGTTGAAAGGACTGTGGGAGAAATATTTCGCATAATCAATAGAACTCCTTTACATATTGCTGAATATCCAGTTGGATTAGAGTCTCGTTTGCAAGAAATAAACTCTCTATTGGAGCTTGAGTTAAAAGGAGAGGGCATTATGGTAGGAATTTGTGGAATGGCAGGAGTGGGTAAAACAACAATAGCACGTGCTTTGTATAACTCAGTAGCTGATAATTTTGAAGGCTTGTGCTTTCTCCATGATATCAAAGAAAACCAAAAGAAACTTGGCTTACAACAAATGCAAGAGAGATTGCTATCAAAGCTTCTAGGAGTGGAGATGAAAATTGATGACGTTAATGAAGGAATTGCAATAACAAAAGAGAGACTTAGACAAAAGAAAATTCTGTTGATTCTTGATAATGTTGAAGAACAACAGCAATTACGAGACTTTGCTGGCCATTGTGATTGGTTTGGTTCTGGGAGTAGAATCGTTATAACGACAAGGGATAAACATTTGCTTGTAAGACATGGGGTTGAAAGAAAATATGAGATGGAGGCATTCAATTATGAAGAATCACTTGAGTTGTTAAGTTGGAATGCCTTTAAAAATGTGCAAGTTGATCCAAGTTATAAAGAAGTTGTGGATCGAGTGATATACTATGCCCAAGGTCTTCCTTTAGCCCTTGAAGTAGTAGGCTCTTACTTGTGTGGTATGAGAATAAGGGAGTGGGAATCTGCTTTAAATGTATACGAAAGAATCCCTCATGAAGACATTCAAAATATATTAAAAACAAGCTATGATGGCTTGGAACAAGTTGAAAAAGAAATTTTCCTTGACATTGCTTGCTTCTTCAAAGGAAGTAAATTGGAATATGTTGTAGATATGGTGAAACATGCTCATGGTTTTGATCCGCGTTATGGTATTCAAGTGTTGGTTAACAAATGCCTCATAAAGATTGAGGAAGATTGGTATAGTTATAAGTTCAATTGTATTGAAATGCATGATTTAATACAAAAAATGGGGCAAGAAATTGTTCGTCAAGAATCACTATATGAGGTAGGAAAACGTAGTAGATTGTGGTTCCATCAAGATATCATTGATATTTTGGAAGAAAATGCAGGTACTGATAAAGTTAGAAGCATCATCATTGAAGACAAATCGCAGGAATGCATAGAAATAGATTGGGATGGAGAAGCCTTCAAGAATATGAAAAATCTCAAAATTCTTATTCTTGAGAATGTTATATTTTCTGAAAGCCCAAAATATCTCCCAAATAGTTTAAAAGTGCTGAAATGGAAGCGATATCCTGTGTCATTTTTGCCATGCGATTTTTGTCCAAAGAAGCTTGTTGTGTTGGATTTGGCACATAGCTTTTTAAATTCACTGGAAACATTCAAGAAGAGTAAAACACTAGGTTGCACATCATTGAGTTCGGAGTCTAGAAACTTACTTTTCACTGAGGAATTACTCAGGTCTGCCCTCAATAATACTAAGGACTGCGTGTTTTTTAATCTTCCGGACATAGTTTTTGGTATATCGGGATCAAACATTAATATTCCCGAATGGTTCAGCCACCAATGTAGAGGATCAAGTATTTGTTTCTGGTTTCGTAACGACTTCCCTACAGCATCTCTCTGTTCAATTTTTAGATCAACGAAACATGTTCTAGGAGACAATACTTTTACACTTAATTATGGAATGATTGCCTTACGAGATGATTATATGGATGCTGTGGTGTTAATCAATGGCCGACAAGTAACTAAGCGCAGATGGCATAAAGCTGCTCCAAATGATGATGTAATGGTTGTGTGTGATCTACATTTAGATCGTTCTGAATATTACAACATGAAATACGCATGTCGAGAAAATGAGTGGAATAATGTGAAGATTGTGTATCGACCAAAGTCCGAGTACTATGTTATTGACAAGATCGGAGTCTATGTAATCACACAAGATGGAAGCATGGAGAATATTCGATTCACTGATCCTTATGAAAGATTGAATTCAAGGAATCTTGACCAAGCTCCATTGTGCTTGTTTACTCCGTCATGGTGCATGGTTGCTTTTGAGAAACTGGAGGAAGCTATAACTACCTCATTCAAAGTTGAGATAATCTACTTCAAGAGGTATTTCAAAGAGTTGTGGTATCTTAACGAGAGTTTTCTCTATTCCCCAATATCAAATTTAATACTAGCTGATCAAGGGACCAAGGAAAAGAAAAGAAGTTTCAGGGGATGGCAGAAATTGAGCGATTACTGTATAAGGAGGGAAATCGATGAGGCAAGAGGGAGAGAATCAAAATGGCATATTGGGCTTGATTTTGAAGTGAATGTGGGCCTTACTGTGTCGAATCAATCGCCACAATTAAAGTGGCTTGCGGCAAAATGTAATTGCTGGGTTATAGAGTAA 2907 0.3684 MTGRASSSTSSVHYHWTYDVFINFRGEDTRYGFTGNLNHALTRKGVRTFFDDKEIRKGDEITPTLLKAIQESRMAIIVFSQNYASSTFCLDELVQIYQCIKQKGRLVWPIFYDVEPSEVRRQKGKYGQALFMHTNNLRASEEKIQSWKLALYEVSNISGTHFNTRHDYEYEFVERTVGEIFRIINRTPLHIAEYPVGLESRLQEINSLLELELKGEGIMVGICGMAGVGKTTIARALYNSVADNFEGLCFLHDIKENQKKLGLQQMQERLLSKLLGVEMKIDDVNEGIAITKERLRQKKILLILDNVEEQQQLRDFAGHCDWFGSGSRIVITTRDKHLLVRHGVERKYEMEAFNYEESLELLSWNAFKNVQVDPSYKEVVDRVIYYAQGLPLALEVVGSYLCGMRIREWESALNVYERIPHEDIQNILKTSYDGLEQVEKEIFLDIACFFKGSKLEYVVDMVKHAHGFDPRYGIQVLVNKCLIKIEEDWYSYKFNCIEMHDLIQKMGQEIVRQESLYEVGKRSRLWFHQDIIDILEENAGTDKVRSIIIEDKSQECIEIDWDGEAFKNMKNLKILILENVIFSESPKYLPNSLKVLKWKRYPVSFLPCDFCPKKLVVLDLAHSFLNSLETFKKSKTLGCTSLSSESRNLLFTEELLRSALNNTKDCVFFNLPDIVFGISGSNINIPEWFSHQCRGSSICFWFRNDFPTASLCSIFRSTKHVLGDNTFTLNYGMIALRDDYMDAVVLINGRQVTKRRWHKAAPNDDVMVVCDLHLDRSEYYNMKYACRENEWNNVKIVYRPKSEYYVIDKIGVYVITQDGSMENIRFTDPYERLNSRNLDQAPLCLFTPSWCMVAFEKLEEAITTSFKVEIIYFKRYFKELWYLNESFLYSPISNLILADQGTKEKKRSFRGWQKLSDYCIRREIDEARGRESKWHIGLDFEVNVGLTVSNQSPQLKWLAAKCNCWVIE 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0858 968 Gene3D - 352 441 IPR042197 -
Lele10g0858 968 SMART AAA_5 216 354 IPR003593 -
Lele10g0858 968 SUPERFAMILY L domain-like 559 631 - -
Lele10g0858 968 Pfam TIR domain 18 176 IPR000157 GO:0007165
Lele10g0858 968 Gene3D - 188 345 IPR027417 -
Lele10g0858 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 446 IPR027417 -
Lele10g0858 968 CDD AAA 196 335 - -
Lele10g0858 968 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Lele10g0858 968 PRINTS Disease resistance protein signature 387 401 - -
Lele10g0858 968 PRINTS Disease resistance protein signature 567 583 - -
Lele10g0858 968 PRINTS Disease resistance protein signature 219 234 - -
Lele10g0858 968 PRINTS Disease resistance protein signature 294 308 - -
Lele10g0858 968 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Lele10g0858 968 SMART till_3 17 157 IPR000157 GO:0007165
Lele10g0858 968 Pfam NB-ARC domain 212 436 IPR002182 GO:0043531
Lele10g0858 968 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 186 - -
Lele10g0858 968 Gene3D - 12 187 IPR035897 -
Lele10g0858 968 SUPERFAMILY "Winged helix" DNA-binding domain 423 535 IPR036390 -
Lele10g0858 968 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 665 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0858 Lele-ChrLele10 7458485 7467744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0858 18 644 WRKY Transcription Factor Family AT4G12020 28.438 3.42e-62 229