Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0849 ATGGCTGAGGAGGAGCCCAAGTCCTTGAACTATATTCCAGAGATTATCTTGAAGAAACGAAAAAGCAGCGAATCATTGGCCTTGAGGAAAAGGGATCAACTTCAGCAGAAGAAGTTCCAAAAAAGGAATTCCAAGGACTACATCAAGAAGCCCGAGGATTTCATCATCGATTATCGAAACAAGGAGCTTGACCTTATTAGAATGAATCGGCGGGTCAAGAGGGTCAAGAAACAACCAGAACTATTGATGCCAAATTCAAATTCCAAGTTATTATTAATCATTCGGATACAAGGAAAAAATGACATGCATCCAAAAACCCAAAAGGTCTTAAACAAATTGAATTTGAGAAGAATTTTCAGTGCTGTCTTTGTGAAGGCAAGTGTCGGAATTATGGCAAAGCTGCAGAAGGTGGAACCATATGTCACCTATGGGTATCCTAATCTGAAAACCATAAAGGAACTGATCCACAAGAAGGGATTCGCAGAAATAGACAACCAGAAAGTTCCTCTGACAGACAATAATATTATTGAACAGGCATTAGGAAAGCATGGAATTGTGTGCATAGAAGACATGGTCCATGAAATTGTTAATGTCGGCCCACACTTCCAAGAAGTTTTTAATTTCTTGTGGCCCTTTGAACTCAACAAGCCAGCTGATGGCTTGCGAGGATCGAAAACCTTATACAAGGATGGTGGAGACACGGGGAACCGGGAAGATCTCATCAACGAACTAATCAACAAAATGAATTAA 750 0.4027 MAEEEPKSLNYIPEIILKKRKSSESLALRKRDQLQQKKFQKRNSKDYIKKPEDFIIDYRNKELDLIRMNRRVKRVKKQPELLMPNSNSKLLLIIRIQGKNDMHPKTQKVLNKLNLRRIFSAVFVKASVGIMAKLQKVEPYVTYGYPNLKTIKELIHKKGFAEIDNQKVPLTDNNIIEQALGKHGIVCIEDMVHEIVNVGPHFQEVFNFLWPFELNKPADGLRGSKTLYKDGGDTGNREDLINELINKMN 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0849 249 TIGRFAM uL30_euk: 60S ribosomal protein uL30 13 249 IPR005998 GO:0000463|GO:0003735|GO:0022625
Lele10g0849 249 Pfam Ribosomal L30 N-terminal domain 13 74 IPR012988 -
Lele10g0849 249 PANTHER 60S RIBOSOMAL PROTEIN L7 9 249 IPR039699 -
Lele10g0849 249 SUPERFAMILY Ribosomal protein L30p/L7e 90 249 IPR036919 -
Lele10g0849 249 Coils Coil 58 78 - -
Lele10g0849 249 Gene3D - 90 249 IPR036919 -
Lele10g0849 249 FunFam 60S ribosomal protein L7 90 194 - -
Lele10g0849 249 CDD Ribosomal_L7_archeal_euk 90 249 IPR035808 -
Lele10g0849 249 Pfam Ribosomal protein L30p/L7e 91 141 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0849 Lele-ChrLele10 7214987 7217052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0849 1 249 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 56.972 8.42e-93 271