Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0842 ATGAACCCTCTGAGGTCTATTCTTTCTTTAGCCTCCCTCTTTCATCGTGGTCATTGCTTCTGTGCTTGGTCTTCGCCACCGTCGTTCAGGGCACCTCCAACCGCCGCCTCCAACTCTACCATATTCTTCCCAGCAACCATGGCTGAGGAGGAGCCCAAGTCCTTGAACTATATTCCAGAGATTATCTTGAAGAAACGAAAAAGCAGCGAATCATTGGCCTTGAGGAAAAGGGATCAACTTCAGCAGAAGAAGTTCCAAAAAAGGAATTCCAAGGACTACATCAAGAAGCCTGAGGATTTCATCATTGAGTATCGAAACAAGGAGCTTGACCTTATTAGAATGAATCGGCGGGTCAAGAGGGTCAAGAAACAACCAGAACTATTGATGCCAAATTCAAATTCAAAGTTATTATTAATCATTCGGATACAAGGAAAAAATGACATGCATCCAAAAACCCAAAAGGTCTTAAACAAATTGAATTTGAGAAGAATTTTCAGTGCTGTCTTTGTGAAGGCAAGTGTCGGAATTATGGCAAAGCTGCAGAAGGTGGAACCATATGTCACCTATGGGTATCCTAATCTGAAAACCATAAAGGAACTGATCCACAAGAAGGGATTCGCAGAAATAGACAACCAGAAAGTTCCTCTGACAGACAATAATATTATTGAACAGGCATTAGGAAAGCATGGAATTGTGTGCATAGAAGACATGGTCCATGAAATTGTTAATGTCGGCCCACACTTCCAAGAAGTTTTTAATTTCTTGTGGCCCTTTGAACTCAACAAGCCAACTGATGGCTTGCGAGGATCGAAAACCTTATACAAGGATGGTGGAGACACGGGGAACCGGGAAGATCTCATCAACGAACTAATCAACAAAATGAATTAA 888 0.4189 MNPLRSILSLASLFHRGHCFCAWSSPPSFRAPPTAASNSTIFFPATMAEEEPKSLNYIPEIILKKRKSSESLALRKRDQLQQKKFQKRNSKDYIKKPEDFIIEYRNKELDLIRMNRRVKRVKKQPELLMPNSNSKLLLIIRIQGKNDMHPKTQKVLNKLNLRRIFSAVFVKASVGIMAKLQKVEPYVTYGYPNLKTIKELIHKKGFAEIDNQKVPLTDNNIIEQALGKHGIVCIEDMVHEIVNVGPHFQEVFNFLWPFELNKPTDGLRGSKTLYKDGGDTGNREDLINELINKMN 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0842 295 Pfam Ribosomal L30 N-terminal domain 59 120 IPR012988 -
Lele10g0842 295 SUPERFAMILY Ribosomal protein L30p/L7e 136 295 IPR036919 -
Lele10g0842 295 Coils Coil 104 124 - -
Lele10g0842 295 CDD Ribosomal_L7_archeal_euk 136 295 IPR035808 -
Lele10g0842 295 Gene3D - 136 295 IPR036919 -
Lele10g0842 295 PANTHER 60S RIBOSOMAL PROTEIN L7 55 295 IPR039699 -
Lele10g0842 295 Pfam Ribosomal protein L30p/L7e 137 187 IPR016082 -
Lele10g0842 295 FunFam 60S ribosomal protein L7 136 240 - -
Lele10g0842 295 TIGRFAM uL30_euk: 60S ribosomal protein uL30 59 295 IPR005998 GO:0000463|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0842 Lele-ChrLele10 7128562 7131488 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0842 47 295 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 56.972 4.77e-92 271