Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0839 ATGTCAAGAAGCAATTCATCAATCTCAATTGCTTCACCAGTGCTTCCACAAATATTGTTTGGAAAGACATCCTTTCCTTATTGCAAGTGGTCGATTCTTTCTCTAGCCTCCCTGCTTCATCGTGGTCATTGCTTCTGTGCTTGGTCGTCGCCACCGTCGTTCAGTCCTCCTCCAACCGCCGCCGCCAACTCTACCGTATTCTTCCCAGCAACCATGGCTGAGGAGGAGCCCAAGCCCTTGAACTATATTCCAGAGATTATCTTAAAGAAACGAAAAAGCAGCGAATCATTGGCCTTGAGGAAAAGGGATGAACTTCAGCAGAAGAAGTTCCAAAAAAGGAATTCCAAGGACTACATCAAGAAGCCTGAGGATTTCATCATTGAGTATCGAAACAAGGAGCTTGACCTTATTAGAATGAATCGGCGGGTCAAGAGGGTCAAGAAACAACCAGAACTATTGATGCCAAATTCAAATTCAAAGTTATTATTAATCATTCGAATACAAGGAAAAAATGACATGCATCCACAAACCCAAAAGGTCTTAAACAAATTGAATTTGAGAAGAATTTTCAGTGCTGTCTTTGTGAAGGCAAGTGTGGGAATTATGGCAAAGCTGCAGAAGGTGGAACCATATGTCACCTATGGGTATCCTAGTCTGAAAACCATAAAGGAACTGATCCACAAGAATGGATTTGCAAAAATAGACAACCAGAAGGTTCCTCTGACCAACAATAACATTATTGAACAAGCATTAGGAAAGCATGGAATTGTGTGCATAGAAGACATGGTCCATGAAATTGTTATTGTCGGCCCACACTTCCAAGAAGTTTTTAATTTCTTGTGGCCCTTTGAACTCAACAAGCCAGCTGATGGCTTGCGAGGATCGAAAACCTTATACAAGGATGGTGGAGACACGGGGAACCGGGAAGATCTCATCAACGAACTAATCAACAAAATGAATTAA 963 0.4185 MSRSNSSISIASPVLPQILFGKTSFPYCKWSILSLASLLHRGHCFCAWSSPPSFSPPPTAAANSTVFFPATMAEEEPKPLNYIPEIILKKRKSSESLALRKRDELQQKKFQKRNSKDYIKKPEDFIIEYRNKELDLIRMNRRVKRVKKQPELLMPNSNSKLLLIIRIQGKNDMHPQTQKVLNKLNLRRIFSAVFVKASVGIMAKLQKVEPYVTYGYPSLKTIKELIHKNGFAKIDNQKVPLTNNNIIEQALGKHGIVCIEDMVHEIVIVGPHFQEVFNFLWPFELNKPADGLRGSKTLYKDGGDTGNREDLINELINKMN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0839 320 Coils Coil 129 149 - -
Lele10g0839 320 Pfam Ribosomal L30 N-terminal domain 84 145 IPR012988 -
Lele10g0839 320 FunFam 60S ribosomal protein L7 161 265 - -
Lele10g0839 320 Gene3D - 266 320 IPR036919 -
Lele10g0839 320 Gene3D - 161 265 IPR036919 -
Lele10g0839 320 TIGRFAM uL30_euk: 60S ribosomal protein uL30 84 320 IPR005998 GO:0000463|GO:0003735|GO:0022625
Lele10g0839 320 PANTHER 60S RIBOSOMAL PROTEIN L7 80 320 IPR039699 -
Lele10g0839 320 CDD Ribosomal_L7_archeal_euk 161 320 IPR035808 -
Lele10g0839 320 SUPERFAMILY Ribosomal protein L30p/L7e 161 320 IPR036919 -
Lele10g0839 320 Pfam Ribosomal protein L30p/L7e 162 212 IPR016082 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0839 Lele-ChrLele10 7076010 7079798 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0839 72 320 Cytoplasmic Ribosomal Protein Gene Family AT1G80750 56.349 5.55e-89 265