Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0834 ATGGCCCAACTCATCAACCTCACATTTCTTGTGATGCTCCTCTTGTCTCTCTTCTCAACTGAGGCTACAGCAAAACAATCCTTAATCAGTTCTCGTCGTCGTCCATATAATCCTCAAACCATTGCTTACATAAAAGCCTCTTGCCAAACCACTTTGTACCCAAATCTATGCCTTCGCTGCCTATATAAATTTTCCAATTCAAACATTCAAAGCCCCCAACACTTGACTCATGCGGCTTTATCTGTGAGTCTCTCACGAGCACTATACACAAAAGATTACTTATTGCAAGTGGCCAAACAATTCAAGGCACTCAACAATGGTAATAATAATGGTAGGGATTATCTAGTTCTACAAGATTGCTTGAAGCAGATCAATGATAGTGTGGACCAGCTGGGGCTTTCAATAAAAGAGCTTACGCAGTTGCATAAGATCCCAAACACTTTGATCAACGATGCCGTGTTGTGGCACATAAGCAACGTTGAGACGTGGATGAGCACTGCCCTTACTGATGCAAGCACTTGTGTGGATTATTTCCCAGGTCATAGGATGAGCAGGATGAAGGCTACAATAAGGGGTAAGGTCTTGAATGTTGCACAAGTTACTAGCAATGCGCTTGCCTTATTTCACAGATATGCAGCTAAGTACCGAGAAGCAGCACAAGCCAAGAAACCCTGA 675 0.4296 MAQLINLTFLVMLLLSLFSTEATAKQSLISSRRRPYNPQTIAYIKASCQTTLYPNLCLRCLYKFSNSNIQSPQHLTHAALSVSLSRALYTKDYLLQVAKQFKALNNGNNNGRDYLVLQDCLKQINDSVDQLGLSIKELTQLHKIPNTLINDAVLWHISNVETWMSTALTDASTCVDYFPGHRMSRMKATIRGKVLNVAQVTSNALALFHRYAAKYREAAQAKKP 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0834 224 Pfam Plant invertase/pectin methylesterase inhibitor 43 207 IPR006501 GO:0004857
Lele10g0834 224 FunFam Pectinesterase inhibitor 3 39 212 - -
Lele10g0834 224 CDD PMEI-like_3 46 213 - -
Lele10g0834 224 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 207 - -
Lele10g0834 224 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 211 IPR006501 GO:0004857
Lele10g0834 224 SMART PMEI_2 39 207 IPR006501 GO:0004857
Lele10g0834 224 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 211 IPR035513 -
Lele10g0834 224 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 43 210 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0834 Lele-ChrLele10 7005641 7006315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0834 30 208 Carbohydrate Esterase AT3G14310 24.862 1.84e-14 70.1