Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0824 ATGGACCAGCCTACACAATTGTTTTTGTTCTTAATAGCTCTTCTCCAATCCATATCAGGAGTAACTTCAACAAAGTTCACAATTGTTAACAAATGCAACTACAAAGTATGGCCAGGCATTAGTTCAGTTGCTGCCAGCATTCCATTATCAACCACCGCTTTTGTTCTTAAAACAGGCGAGTCTAGGATCATCTCTGCGCCCACATCTTGGAATGGCCGCATTTGGGGTCGAACTCAATGCACACAAGACTACACCGGAAACTTCTCCTGTGTCACCGGTGACTGTGGCTCCGGGAAGCTTGAATGCGAAGGCAGGGGAAGCACACCGCCTACGACGTTGATAGAATTTTCTTTAAGCCAATTCCAAAGCTCTGATTTTTATGACGTGAGCTTGGTAGATGGATTCAATGTGCCTGTAGCGGTTGTTCCTCATGGTGGTTGTGGAGACTGCAAGAGCACATATTGTTTGGCAGATATGATCAGCCTATGCCCTTCAGAGCTGAGGGTAATGAGCAAAGATGGAAAAGTGGTGGCATGCAAGGGCCCTTGTGAGGCAGATGACTCATTGCAAGCCTGTGGCAACAATGCTTCCCGGCCCTCCTCTTATGCACAGCTATTCAAGAGCGTTTGCCAACGTGCCTATAGTTTTCCACTAGATGATCAACTAAGCACATTCACATGTCAAGATGCAGATTATAATATCACCTTTTGTGAATCCCCCTACAAAAATTTGGACACATCTGGCGCCTCATCGTGCACGGAAACCATCACGTCATCTCACTACATCAAGGATCCAGATACAATAAGCTCCAGAGGGGGTTTGTTCACACTAGGGTTCTTCAGTCCTGAAAATTCTACGAATGGCTATGCGGGAATTTGGTACATGTCCAATTCCACTATTGTATGGGTGGCTAACAGAAATCGACCATTTAGGGATACTTCAGGAATTGTTAGGATATCTGAAGATGGCAATCTTGTGGTATTAGATGGGAAAAACCAAACCATTTGGTCATCAAATGTGTCAAATATTTCATCTACTACTAGTTGGCAGATTTTAGATTCTGGAAACCTTGTCCTAATGGATACCTCGATGAAAACTGTATGGCAAAGTTTTGAGCATCCTTCAGATACATTGTTGCCAGGCATGAAAATTACCAGAAACAAAAGAACAAGGCAGACACAGAAGTTAACAGCATGGAAAAATGGGTCTGATCCATCCCTTGGCAATTTCTCTCTGAGTCTGGAACAACTAAATTTTGCTGAATTGTTCATATGGAATGCAACTAGCCCCTATTGGCGTAGTGGTCCATGGAATGGCCTTACAACAGTCCTCAAGATGAGTTCCGAGTATGATAATGGTGCTGAAGAGATGGTTGTCAGCTTATCGAATGGATCTGACATCAAAGAGATGGTTGTTCTGAATTCAAAAGGAAAGTTATTACATAAACAATGGGATGATACTAAGAGGCAATGGCAAGAAACCAATCTTGTTCAAAATTCAGATTGTGATGTTTATGGTGTATGTGGGGAATTTGGGATTTGCAATTCAAAGAGTGTGCCAATCTGCAGTTGTTTGCATGGGTTTGAACCAAGAAGTAAGGAGGAATGGAACAGACAAAATTGGACAGGGGGTTGTGTTAGTAAATCAACTCTGCAATGTGTGAGAGTGAAAAATGGAAGTTCCAATGGAAAGGAAGATACGTTTTACCATCTGCAAAATGTTAAAGTACCAGGTTTTGGAGAACAATCATCTAATTCAGAAGACAAGTGCAGAATCCAGTGCTTGGAGAACTGCACTTGTAAAGCATATTCATATAATTCAGTACTTGGATGTATGACTTGGAAAGAAAATTTAATTGACATACAACAGTTCTCAAACGGAGGAATTGACCTATATATCCGTGCCGCTGATAAGAAGAAACCTAGGACATTCATCATTGTAATCATTGCAGTAGTAGGAGCTATCATTATCAGTGTCACTGGTGCATACTTCTTATGGAAGTGGAAGGCAAAACAAGCAGGAAAATGGAAAAGCAAACGGTTCTTGTTAAAACGGCGTGGTGCAAATGAAGACAAAACAAATGGCAATATTATTGAAATATTGGCACAAGTAAAATTCCAGGAGGTATTGGTTTTTGATTTTGAAAAGGTTGCAATGGCTACAAACAACTTTCAATTGACCAATAAACTTGGGCAAGGCGGTTTCGGTCCAGTCTATAAGGCTTCAACATCGGAATCTCGAAGAGTTGTTGGAACCTATGGCTATATGTCTCCAGAATATGCAATGGAAGGATTATTTTCAGAGAAATCAGATGTGTTTAGCTTTGGAGTTTTACTATTAGAGATTATAAGTGGAAGAAAAAACTCAAGCTTTCATAATAATGAGCACTCTCTTAGCCTGCTAGGATTTGCATGGAAACTATGGAATGAAGAAAACATTGTACAGCTAATAGATCCTGAAATATCTAGTCAAAACCTGGAGAAGGATATATTGAGGTGCATACACATAGGACTTCTATGTGTACAAGAACTTGCCACAGACAGGCCAAGCATGAGCGTTGTAGTTTCTATGCTTAATAGTGAGATTCTCAATCTTCCTCCTCCAAGGCAACCTGCATTCATCCAATGGCAGAGTATATTGAATCAATTGACCATAGAAGAAAATCAAAGATTATATTCCAACAACCAAGTTAGTATTAGTGACATACAGGGCAGATAG 2718 0.4073 MDQPTQLFLFLIALLQSISGVTSTKFTIVNKCNYKVWPGISSVAASIPLSTTAFVLKTGESRIISAPTSWNGRIWGRTQCTQDYTGNFSCVTGDCGSGKLECEGRGSTPPTTLIEFSLSQFQSSDFYDVSLVDGFNVPVAVVPHGGCGDCKSTYCLADMISLCPSELRVMSKDGKVVACKGPCEADDSLQACGNNASRPSSYAQLFKSVCQRAYSFPLDDQLSTFTCQDADYNITFCESPYKNLDTSGASSCTETITSSHYIKDPDTISSRGGLFTLGFFSPENSTNGYAGIWYMSNSTIVWVANRNRPFRDTSGIVRISEDGNLVVLDGKNQTIWSSNVSNISSTTSWQILDSGNLVLMDTSMKTVWQSFEHPSDTLLPGMKITRNKRTRQTQKLTAWKNGSDPSLGNFSLSLEQLNFAELFIWNATSPYWRSGPWNGLTTVLKMSSEYDNGAEEMVVSLSNGSDIKEMVVLNSKGKLLHKQWDDTKRQWQETNLVQNSDCDVYGVCGEFGICNSKSVPICSCLHGFEPRSKEEWNRQNWTGGCVSKSTLQCVRVKNGSSNGKEDTFYHLQNVKVPGFGEQSSNSEDKCRIQCLENCTCKAYSYNSVLGCMTWKENLIDIQQFSNGGIDLYIRAADKKKPRTFIIVIIAVVGAIIISVTGAYFLWKWKAKQAGKWKSKRFLLKRRGANEDKTNGNIIEILAQVKFQEVLVFDFEKVAMATNNFQLTNKLGQGGFGPVYKASTSESRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGRKNSSFHNNEHSLSLLGFAWKLWNEENIVQLIDPEISSQNLEKDILRCIHIGLLCVQELATDRPSMSVVVSMLNSEILNLPPPRQPAFIQWQSILNQLTIEENQRLYSNNQVSISDIQGR 905
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0824 905 Pfam PAN-like domain 563 621 IPR003609 -
Lele10g0824 905 CDD PAN_AP_plant 558 634 - -
Lele10g0824 905 Pfam Thaumatin family 30 237 IPR001938 -
Lele10g0824 905 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Lele10g0824 905 PRINTS Pathogenesis-related protein signature 228 237 IPR001938 -
Lele10g0824 905 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Lele10g0824 905 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Lele10g0824 905 SUPERFAMILY Protein kinase-like (PK-like) 709 749 IPR011009 -
Lele10g0824 905 Gene3D Transferase(Phosphotransferase) domain 1 701 864 - -
Lele10g0824 905 SMART ntp_6 563 635 IPR003609 -
Lele10g0824 905 Pfam S-locus glycoprotein domain 432 531 IPR000858 GO:0048544
Lele10g0824 905 CDD TLP-PA 25 237 - -
Lele10g0824 905 ProSiteProfiles Bulb-type lectin domain profile. 253 372 IPR001480 -
Lele10g0824 905 ProSitePatterns Thaumatin family signature. 86 102 IPR017949 -
Lele10g0824 905 Gene3D Thaumatin 24 237 IPR037176 -
Lele10g0824 905 SUPERFAMILY alpha-D-mannose-specific plant lectins 291 439 IPR036426 -
Lele10g0824 905 ProSiteProfiles Thaumatin family profile. 23 237 IPR001938 -
Lele10g0824 905 Pfam Protein tyrosine and serine/threonine kinase 753 858 IPR001245 GO:0004672|GO:0006468
Lele10g0824 905 SMART blect_4 259 374 IPR001480 -
Lele10g0824 905 Pfam D-mannose binding lectin 299 400 IPR001480 -
Lele10g0824 905 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 749 850 - -
Lele10g0824 905 SMART tha2 26 238 IPR001938 -
Lele10g0824 905 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 249 371 - -
Lele10g0824 905 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 738 863 - -
Lele10g0824 905 SUPERFAMILY Protein kinase-like (PK-like) 746 893 IPR011009 -
Lele10g0824 905 SUPERFAMILY Osmotin, thaumatin-like protein 25 237 IPR037176 -
Lele10g0824 905 CDD B_lectin 259 374 IPR001480 -
Lele10g0824 905 Gene3D - 248 372 IPR036426 -
Lele10g0824 905 FunFam THAUMATIN-LIKE PROTEIN 1 24 238 - -
Lele10g0824 905 ProSiteProfiles PAN/Apple domain profile. 553 636 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0824 Lele-ChrLele10 6751190 6755115 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0824 751 867 Receptor kinase-like Gene Family AT5G38280 32.258 3.00e-10 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele10g0824 Thaumatin 6.4e-63 CL0293