Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0819 ATGGGAAGAGCTCCTTGCAGTGACAAAAATGGACTCAAGAAGGGTCCATGGACGCCTGAGGAAGATCTAAAGCTTATCAACCACATCCAGACTCGTGGACCCGGCAATTGGCGAACCATCCCCAAGAATGCTCGTCTGCAAAGATGTGGCAGAAGTTGCCGGCTTCGATGGACAAATTACCTGAGACCTGATATCAAGAGAGGGAGATTTTCCTTTGAAGAAGAAGAAGCCATCATTCAGTTGCACAGTATCATGGGAAACAAATGGTCGGCTATAGCAGCAAGATTACCAGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACTCACATCAGGAAGAGACTGCTTCGAAATGGAATCGATCCTGTTACTCATGCCCCACGACTCGACCTTCTTGAGATATCTTCCATTCTAAGATCAGCGCTGACCAACCAATCGCTTCTGAATCTGCAAAGTTTATTGGGAGCTCAAGCTTTGATGAACCCAGAACTGTTGAAGCTGGCCACCACTCTGTTAGCTCTCAAGAATAATGAGAACCCAGATTTGGTTTCACAGAATCTACAACAAAGCATGATGCAGCCCGGGAATATCAGTCAGATGCCAACTCAGAGTACCAATATGCATGAAGCTCTCACAGGCAATATCACAAACATGTGCTGTACAAGTCCGCTACAGAATTCATCACTTCCTTCATGTTTGTCTGATGAGAATCCTATTAATCCGCAACAAAACCAAGTTGATTTGCAAGGAATAAGAAACCCAACAACATTCGGGCAGAGTTTAATAAACAATGAAAATGTCCAAAACATGGACTATGATTCAGTTCTGTCAACGCCCTTGTCGAGCCCAACCCCATTAAATTCATCATCTTCGTATGTGAATAGCAGCGCGGAGGAGCAAAATGATACCCATTGCAGCGATTTGTTCAAGTTCGAAATTCCAGAGAGTCTCGACATCAGTGACTTCTTGTAA 975 0.44 MGRAPCSDKNGLKKGPWTPEEDLKLINHIQTRGPGNWRTIPKNARLQRCGRSCRLRWTNYLRPDIKRGRFSFEEEEAIIQLHSIMGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRNGIDPVTHAPRLDLLEISSILRSALTNQSLLNLQSLLGAQALMNPELLKLATTLLALKNNENPDLVSQNLQQSMMQPGNISQMPTQSTNMHEALTGNITNMCCTSPLQNSSLPSCLSDENPINPQQNQVDLQGIRNPTTFGQSLINNENVQNMDYDSVLSTPLSSPTPLNSSSSYVNSSAEEQNDTHCSDLFKFEIPESLDISDFL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0819 324 Gene3D - 13 66 - -
Lele10g0819 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele10g0819 324 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele10g0819 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele10g0819 324 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 266 - -
Lele10g0819 324 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele10g0819 324 SMART sant 13 63 IPR001005 -
Lele10g0819 324 SMART sant 66 114 IPR001005 -
Lele10g0819 324 FunFam MYB-related transcription factor 13 66 - -
Lele10g0819 324 Gene3D - 69 116 - -
Lele10g0819 324 MobiDBLite consensus disorder prediction 275 300 - -
Lele10g0819 324 CDD SANT 16 61 IPR001005 -
Lele10g0819 324 FunFam Transcription factor MYB39 69 130 - -
Lele10g0819 324 CDD SANT 69 112 IPR001005 -
Lele10g0819 324 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele10g0819 324 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele10g0819 324 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0819 Lele-ChrLele10 6624791 6626131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0819 1 324 MYB Transcription Factor Family AT4G21440 48.179 2.45e-100 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0819 Myb_DNA-binding 1.7e-12 CL0123