Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0803 ATGCTTGTGATGTTGCCTTACCAACAACAACACCTAAATCATTTTTGTAGTACACACACCACTTATCAGCTCCCTCATGCCCCAATACCAACCAAACCCATTATTATAATGGAACCAGTTCTAAGTTATAACAATACCAGCGCTAGCTATGGCAGCAACAGCAACAACGATAACGACGATGGACACAATAATAATATCATTAGTTGGTTTGAAGATGTAACAGAGAAGGCAGGTTCTGTTCAGACCCAGATCTTATCCCAGATTCTGAAGCAGAACTATGGCGTTGAATATCTCAACAAATGGTTGGGGAACTACAATATCCTCGACATGGATGCTTGTGCATTGGAATCTCTTTTCACTTCTGTTGTTCCCCTCGCTTCTCATGAAGATTTGGAGCCTTTTATCCAGAGGATTGCAGATGGCGACACTTCTCCCTTACTCACTCGACAACCCACCATTACCAATCTTTCCTTAAGTTCTGGAACCACAGAGGGAAGGCAAAAGCTTGTACCTTTCACCCGACACAGCGCCCAAACTACCCTACAAGTCTTCACTTTAGCCGCAGCCTACAGATCAAGGGTTTATCCCATAAGAGAAGGAGGTAGGATTCTTGAATTCATATACAGCAGCAATCAGTTTCAAACTAAAGGAGGCTTAAAGGTAGGAACAGCCACAACACACTATTATGCTAGCCAAGAGTTTAAAATCAAACAAGAGAAAACAAAATCATTCACTTGTAGCCCTGATGAGGTGATTTCAGGAGGAGACTATGAACAATCCACATATTGCCACCTTCTTCTTGGCCTCTACTTCTCTGATCAAGTTGAGTTCATCACTTCAGCTTTTGTCTATAGCATTGTGCAGGCTTTTCGTAGTTTAGAAGAACTTTGGAGAGATATTTGCAATGACATTAAAAATGGAAGCTTGAGCTCGAGAATCACAGTACCCAAAATGAGAAAAGCTGTTTTGAATCTGATTTCCCCAAACCCATCTCTATCCTTAAAAGTACAAGCTGCTTGCTTGGAATTAGAGCAAGATCAGGTGAATTGGTTTGGTGTGATTCCTAAGCTTTGGCCAAATGTTAAGTACGTATATTCCATAATGACGGGGTCTATGCAACCTTACTTGAAAAAACTAAGACATTATGCAAACGAGTTGCCATTAGTAAGTGCTGATTATGGATCTACTGAGAGCTGGATTGGGGTTAATGTGGATCCTAGTTTGCCTCCCGAGAATGTAACATATGCTGTCGTCCCTACTTTCTCGTACTTCGAGTTCATACCTCTTCATAGACAGATCAAGCAAGGTTTCAATAATTCAGTTGCTGATGATTTCATGGAGGATTTGCCTATTCCACTGTCCCAAGTTAAGGTTGGACAAGAGTATGAAATAGTTCTCACAACTTTCACTGGACTGTATAGGTGCAGACTAGGGGACGTAGTGGAAGTTGCAGGATTTCACAATGGGACCCCAAAGTTGAATTTCATATGCAGAAGGAAGCTAATACTGACAATAAACATAGATAAGAACACAGAGAAAGATCTTCAGCTAGTGGTAGAAAGAGCCTCCGATCTGCTGAACAAGGAAGGAGCAGCAGAGGTGGTGGACTTCACTAGCTATGCCGACGTATCGAAGCCAACGGGACACTACGTGATCTTCTGGGAGATCAAAGGCCACGCAGATGACAAGTTGCTACACAAATGTTGCACACAAATGGACTTGTCCTTCGTCGATCATGGCTACGTTGTGTCCAGAAAGACCCAAGCCATTGGCCCTCTTGAACTCAGAATCGTTCAGGGAGGCACTTTCAAGAGAATTCTTGACCATTTCGTTGCAAATGGGGCTGCTCTTGGCCAGTTCAAGACCCCTAGGTGCACCACTAACACTGGCCTCCTCAGTATCCTCTCTTCCTCCACCATTAGGACCTTTCGCAGCACTGCCTATGCTTAG 1950 0.4318 MLVMLPYQQQHLNHFCSTHTTYQLPHAPIPTKPIIIMEPVLSYNNTSASYGSNSNNDNDDGHNNNIISWFEDVTEKAGSVQTQILSQILKQNYGVEYLNKWLGNYNILDMDACALESLFTSVVPLASHEDLEPFIQRIADGDTSPLLTRQPTITNLSLSSGTTEGRQKLVPFTRHSAQTTLQVFTLAAAYRSRVYPIREGGRILEFIYSSNQFQTKGGLKVGTATTHYYASQEFKIKQEKTKSFTCSPDEVISGGDYEQSTYCHLLLGLYFSDQVEFITSAFVYSIVQAFRSLEELWRDICNDIKNGSLSSRITVPKMRKAVLNLISPNPSLSLKVQAACLELEQDQVNWFGVIPKLWPNVKYVYSIMTGSMQPYLKKLRHYANELPLVSADYGSTESWIGVNVDPSLPPENVTYAVVPTFSYFEFIPLHRQIKQGFNNSVADDFMEDLPIPLSQVKVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTINIDKNTEKDLQLVVERASDLLNKEGAAEVVDFTSYADVSKPTGHYVIFWEIKGHADDKLLHKCCTQMDLSFVDHGYVVSRKTQAIGPLELRIVQGGTFKRILDHFVANGAALGQFKTPRCTTNTGLLSILSSSTIRTFRSTAYA 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0803 649 Pfam GH3 auxin-responsive promoter 69 628 IPR004993 -
Lele10g0803 649 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 64 648 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0803 Lele-ChrLele10 6436091 6441603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0803 70 646 EF-hand Containing Proteins AT1G23160 35.980 3.14e-121 370
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1027 31 17256379 17262736 Lele10g0803 10 6436091 6441603 CCT
Lele32g0496 32 3101763 3105679 Lele10g0803 10 6436091 6441603 CCT
Lele10g0803 10 6436091 6441603 Lele10g0803 10 6436091 6441603 ECH
Lele10g0803 10 6436091 6441603 Lele12g0461 12 12502284 12506883 hybridization