Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0798 ATGACCTATGCTTCTCTTATGAAACCGTTAGGCCAGCAAATTGCAGGTAACCCGGAGGAACTTGATGAATTGCTGGGACAGGTTGAAATATGGCACTACATGACCAGCTTCACCGATTCCGTCGCCCTCAAAGTCGCCGTCGAGCTTCGAATAGCCGACATTATCGACCACAATGGCCAACCCGTGACCCTTCAAAAGATCGTCGACAACATTGCCGGCGCTCCAAGCCCAGAAGTCACGTTCCTCTTTCGTATCATGCGAGTTCTTGTCCGCCGCAAGATCTTCTCCGCCCACCAAACTGACTCCGGCGAGACCCTTTACGGCCTAACCCGTGCTTCCAGATGGCTCCTCCGTGACACCAAAATGACCCTCTCACCCATGCTCCTCCTCGAGAACCACCCCATTCACTTGAACCCTGCTCACTACATTAGCCAATGTATCAGAGAAGGAACCAAAGACGGCACTGCTTTTTTCAAGTGCCATGGCCACGAGCAATTCGACCTCACCGGTTTGGACCCTGAATACAACAGGTTGTTCAATGAGGGCATGGTCTGCACCGCTAGGGTTACGTCCAAGGCTGTTATTTCCGGCTACAAGGATGGATTCAACAAGATTCAATCCTTGGTCGACGTAGGTGGCGGCATCGGAGGATCACTCTCTGAGATCGTTCGAGCTTACCCACACATCAAAGGTATCAACTTTGATCTTCCCCACGTGGTCGCCACCGCACCAAACTACGACGGAATCACCCACGTCGGAGGAAACATGTTCGACTCCATCCCTAAAGCCGATGCCATCTACATGAAGTGGATTCTGCATGATTGGAGCGACCAGCACTGCGTTCAGATATTGAAGAACTGCAGAAAAGCGATACCGGAGAAGACAGGGAAGGTGATAATAGTGGATCATGTTCTGCAACCAGAAGGGAACAATGGGCTGTTCGATGAGGTAGGGTATGCATTTGACATGATGCTTCTGGCACATAATTCTGGTGGAAGGGAAAGAACTGAGCAGGATTGGAAGAGGTTGTTTGAAGAAACTGGATTTCCTCGTTACAACATCATCAAGATCAAGGCTCTGCAATGCATCATTGAAGCCTTCCCAATCTAA 1110 0.5018 MTYASLMKPLGQQIAGNPEELDELLGQVEIWHYMTSFTDSVALKVAVELRIADIIDHNGQPVTLQKIVDNIAGAPSPEVTFLFRIMRVLVRRKIFSAHQTDSGETLYGLTRASRWLLRDTKMTLSPMLLLENHPIHLNPAHYISQCIREGTKDGTAFFKCHGHEQFDLTGLDPEYNRLFNEGMVCTARVTSKAVISGYKDGFNKIQSLVDVGGGIGGSLSEIVRAYPHIKGINFDLPHVVATAPNYDGITHVGGNMFDSIPKADAIYMKWILHDWSDQHCVQILKNCRKAIPEKTGKVIIVDHVLQPEGNNGLFDEVGYAFDMMLLAHNSGGRERTEQDWKRLFEETGFPRYNIIKIKALQCIIEAFPI 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0798 369 Pfam Dimerisation domain 42 90 IPR012967 GO:0046983
Lele10g0798 369 Gene3D Vaccinia Virus protein VP39 118 369 IPR029063 -
Lele10g0798 369 PIRSF O-mtase 12 369 IPR016461 GO:0008168
Lele10g0798 369 SUPERFAMILY "Winged helix" DNA-binding domain 26 119 IPR036390 -
Lele10g0798 369 Gene3D - 15 116 IPR036388 -
Lele10g0798 369 Pfam O-methyltransferase domain 142 349 IPR001077 GO:0008171
Lele10g0798 369 PANTHER O-METHYLTRANSFERASE 35 351 IPR016461 GO:0008168
Lele10g0798 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 366 IPR029063 -
Lele10g0798 369 CDD AdoMet_MTases 208 305 - -
Lele10g0798 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 31 368 IPR016461 GO:0008168
Lele10g0798 369 FunFam O-methyltransferase family protein 118 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0798 Lele-ChrLele10 6354536 6357549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0798 41 369 Monolignol Biosynthesis Gene Families AT5G54160 37.725 7.38e-78 242