Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0784 ATGGCCAGAACTACGAGGCTCTGCTACCTTCTGTTAAGGGTTATTGCCTTCGGGGCAACCCTTTCATCCACCATTGTCATGGCTACTAGCCATGAAACAGTTAGCTTCTTCACAGTATCCTTCGAAGCAAAGTACACTCACTCCTCTGCCTTCAAGTACTTTGTAATTGCAAACTCTGTAGTCGCTGTCTACGGATTCTTGGTCCTCTTTCTTCCCTCAGGAAGTCTTCTCTGGCAATTGGTCGTTTTCTTTGATTTGGTGTTCACGTTATTACTGACCTCAAGCATATCTGCGGCATTGGCTATGGCTTATGTGGGCAAGAAAGGAAACAAATATGCTGGTTGGCTGCCAGTATGTGGTCAAGTACCAAGATATTGCAATCAAGTTACAGGAGCTTTAGCCTCTGGGTTCATTGCACTCATTATGTATATTCTTCTTCTTTTTCATTCCATTTATAGCATCCTATCTCTTCTTCAAGTTCTGAATACTAGTGGTATCATCGTAAAACAACATGAAGCACCAACAAGATTCAAAGTCTCTAAATTTAGTGATCTCAAAACAAAGATGGAGCCTTTGCTGAAAGGCGAAAGCAGTGGTCAGAGGATGCGGTCGCCGGCGTTATTCCATCGTCGCTCACATGCTATCGCTTACGGCTCGCCCTCCGTGAAAGCGGCTGCCCTTGTGGATCTGGCTGAAGATGGCGTTGGCATCCCAGAGCAAATACTCGATTCATCGGAATTTCAGAGTTCCGCTAGATTTTACTTTATATTTACTAAATTAAACTTTATATGGTCACTTGGTTACTTTGCCCTGCTAATCCTGAATTTCCTTGAGAAACCCTTGTGGTGTGAAAAGTATACCGCTTATTCTTGCGACGATAGAGTGTATTTCTTCCTGGGACAGCTGCCGTATCTAACTGGTGCAGAATGTGTTATTTATGAGGGTATAACTCTTCTTGTGCTTATTGTGCATACCTTTTTCCCGATATCCTATGAAGGCTCCCGTATATATTGGAAAAAAATTGTTAATCAATTGAAGGTATTGTGCCTGTTAGTTCTGGTTGCTGATATGGTGGTTTATGCTCTGTACTTGTCTCCAGTGACTGTTTATTCTCTACCTGTCAGATTTGCACCTTATGTCAGAGTTGTTCTTTTCATTTTACATATTAGGGAATTACGAGCAACCATTATCATCTTGGCTGGAATGCTTGGCACATACCTGAATGTCCTGGCTTTGGGGCTTCTGTTTCTTCTTTTCTCAAGTTGGGTAGCCTATGTGATGTTTGAAGATACACAACAGGGGAAAATAGTATTCACTTCCTATGGCACCACGTTATATCAGATGTTTGTTTTATTTACCACATCCAATAATCCAGATGTTTGGATTCCTGCATACAAGGCTTCACGTTGGTATTGCCTATTTTTTGTTCTCTTTGTGCTTTTGGGGGTTTACTTTGTCACGAACTTGGTCCTTGCTGTTGTTTATGACAGTTTCAAGAGTGAGCTTGCAAAACAAGTTTCTGAGATGGACCGAATGAGAAAAAATATGTTGGGGAAAGCATTTGATCTATTAGATAATAATCATGTTGGGCATCTAAACAAAGGCCAATGCATTGAACTCTTCCATGAGCTGAACAAGTACAGGACTTTGCCAAAGATTTCCCGAGAAGAATTTGAGTTGATATTTGATGAGCTGGACGATAGTCGTGATGTAAAGATCAACAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTCAAGTTCCAGAAGGAGGATAGTCTATCTTACTTTGAGTATCTTCCATTCTACCACGCTCCTATCTCCAAGGAGTTCAAAGCATTTGTACGGAGCCTGAAGTTTGGATACCTAATATCCTTCATTCTTATATTGAATCTGATTGCTGTTATAATTGAGACAACGCTTGATATACAAAATAATTCTGCTCAAAAGGTTTGGCAAGTGGTTGAATTTGTTTTTGGGTGGATATATGTAATAGAAATGGCTTTAAAAGTTTATGCATATGGATTCGAGAATTATTGGCGGGATGGTCAGAATCGTTTTGACTTTGTGATCACATGGGTAATTGTCATTGGAGAAACTATAACTTTTGCTACACCAGGACAGGATTTTTTCTCAAATGGAGAATGGATTCGGTACCTTCTTCTTGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGCATGTCCCGCAATACCGAGCCTTTGTGGCAACCTTCCTAACTCTCATACCGAGTTTGATGCCATACCTTGGAACCATATTTTGTGTCTTATGTATTTATTGCTCCCTTGGCGTACAGATCTTTGGAGGAATTGTCAATGCTGGAAATCCCAAATTGGAAGCAACAGATCTTGCTGACAATGACTATCTGATCTTCAATTTTAATGATTACCCAAATGGAATGGTCACACTTTTCAATTTGCTAGTCATGGGAAACTGGCAAGTATGGATGCAGAGCTACAAGGAATTAACAGGGACTTCTTGGACCTATATTTACTTTATCAGCTTCTACTTAATAACTGTTCTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTCGAGACGTCTGCTGATACTGGCGAAGAAGATGACAAGGAAACTGAAGGAGAGAAACATCGAAGACGACGTATTGGAACCAAAACACGTAGCCAAAGGGTTGATGCTCTACTTCATCATATGTTGAGCTCTGAGTTATGTCAAGCACAGCCTTCCGATCCATAA 2769 0.4063 MARTTRLCYLLLRVIAFGATLSSTIVMATSHETVSFFTVSFEAKYTHSSAFKYFVIANSVVAVYGFLVLFLPSGSLLWQLVVFFDLVFTLLLTSSISAALAMAYVGKKGNKYAGWLPVCGQVPRYCNQVTGALASGFIALIMYILLLFHSIYSILSLLQVLNTSGIIVKQHEAPTRFKVSKFSDLKTKMEPLLKGESSGQRMRSPALFHRRSHAIAYGSPSVKAAALVDLAEDGVGIPEQILDSSEFQSSARFYFIFTKLNFIWSLGYFALLILNFLEKPLWCEKYTAYSCDDRVYFFLGQLPYLTGAECVIYEGITLLVLIVHTFFPISYEGSRIYWKKIVNQLKVLCLLVLVADMVVYALYLSPVTVYSLPVRFAPYVRVVLFILHIRELRATIIILAGMLGTYLNVLALGLLFLLFSSWVAYVMFEDTQQGKIVFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLFVLLGVYFVTNLVLAVVYDSFKSELAKQVSEMDRMRKNMLGKAFDLLDNNHVGHLNKGQCIELFHELNKYRTLPKISREEFELIFDELDDSRDVKINKDEFADICNAIAFKFQKEDSLSYFEYLPFYHAPISKEFKAFVRSLKFGYLISFILILNLIAVIIETTLDIQNNSAQKVWQVVEFVFGWIYVIEMALKVYAYGFENYWRDGQNRFDFVITWVIVIGETITFATPGQDFFSNGEWIRYLLLARMLRLIRLLMHVPQYRAFVATFLTLIPSLMPYLGTIFCVLCIYCSLGVQIFGGIVNAGNPKLEATDLADNDYLIFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTSWTYIYFISFYLITVLLLLNLVVAFVLEAFFAEMELETSADTGEEDDKETEGEKHRRRRIGTKTRSQRVDALLHHMLSSELCQAQPSDP 922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0784 922 FunFam Two pore calcium channel protein 1 391 502 - -
Lele10g0784 922 TIGRFAM A_tha_TIGR01569: plant integral membrane protein TIGR01569 10 153 IPR006459 -
Lele10g0784 922 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 190 918 IPR044581 GO:0005245
Lele10g0784 922 Gene3D - 611 741 IPR027359 -
Lele10g0784 922 FunFam Two pore calcium channel protein 1 611 742 - -
Lele10g0784 922 ProSiteProfiles EF-hand calcium-binding domain profile. 553 588 IPR002048 GO:0005509
Lele10g0784 922 Gene3D - 498 582 - -
Lele10g0784 922 Gene3D - 742 904 - -
Lele10g0784 922 Coils Coil 495 515 - -
Lele10g0784 922 Pfam Casparian strip membrane protein domain 4 141 IPR006702 -
Lele10g0784 922 SUPERFAMILY Voltage-gated potassium channels 620 863 - -
Lele10g0784 922 FunFam Two pore calcium channel protein 1 743 901 - -
Lele10g0784 922 SUPERFAMILY EF-hand 507 598 IPR011992 -
Lele10g0784 922 Pfam Ion transport protein 621 864 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele10g0784 922 Pfam Ion transport protein 319 500 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele10g0784 922 MobiDBLite consensus disorder prediction 874 898 - -
Lele10g0784 922 Gene3D - 391 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0784 Lele-ChrLele10 6223008 6239294 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0784 190 920 Ion Channels AT4G03560 68.759 0.0 1056