Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0767 ATGGATGAGATTAAACCGAAGACGGTGGTGAAGAGGGAGGCCTTGGGGTTGGGGGATTACGAGGAGAAAAAAAATGGATTCTTGCTGTTTGGGGAAGATGACCAGAGGAAGAAAGTGACCGTGAAGAAAGGGTCTGCGGGCGGCGGAGGAGGAGGAAGTGGTATGCGGTGTTGCCAGGCGGAGAACTGCACTGCGGAGCTGAGTGATGCGAAGCCGTATCATAAGAGGCACAAGGTGTGCGAATATCATGCCAAGGCTCAGGAAGTAATCGTTTGTGGCATACGACAACGTTTTTGTCAGCAATGCAGCAGATTCCATGAGTTGGGTGAGTTTGATGAGACGAAGAGAAGTTGCAGGAGGCGATTGGCAGGGCATAATGAACGAAGAAGGAAGAGTTCAGTGGGTGAGAATCAAGGAGAAGGGTCGAGCCAGAAAAGAACAGGGATGAAGGACAGGGATGAAAGAGCCAGAATTCAGATCACTATATAA 489 0.499 MDEIKPKTVVKREALGLGDYEEKKNGFLLFGEDDQRKKVTVKKGSAGGGGGGSGMRCCQAENCTAELSDAKPYHKRHKVCEYHAKAQEVIVCGIRQRFCQQCSRFHELGEFDETKRSCRRRLAGHNERRRKSSVGENQGEGSSQKRTGMKDRDERARIQITI 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0767 162 Pfam SBP domain 58 131 IPR004333 GO:0003677
Lele10g0767 162 SUPERFAMILY SBT domain 56 134 IPR036893 GO:0003677|GO:0005634
Lele10g0767 162 MobiDBLite consensus disorder prediction 122 162 - -
Lele10g0767 162 MobiDBLite consensus disorder prediction 145 162 - -
Lele10g0767 162 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 40 142 IPR044817 GO:0003677
Lele10g0767 162 Gene3D - 48 119 IPR036893 GO:0003677|GO:0005634
Lele10g0767 162 ProSiteProfiles Zinc finger SBP-type profile. 55 132 IPR004333 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0767 Lele-ChrLele10 5975392 5976050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0767 43 160 SBP-box Gene Family AT1G53160 57.025 5.38e-42 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele10g0767 SBP 1.3e-30 No_clan