Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0753 ATGATATTTAGAAGATTATACGAGGAACAAATAATGACTCAGTGCAATGACTCTGAAAATAATATCATCGTCGACAAACGCGAAGACAGCTTAATCACAACAACATGCCCTTCCTGTGGACATCATATCAAATCCCACGAACAGGCTGGGATCCATGACTTGCCTGGGCTGCCTGCTGGAGTGAAGTTTGATCCGACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTTCGATCTGATATTCATAAGCTTCATCCATTGATTGATGAGTTCATCCCTACTCTTGAAGGCGAGAATGGAATCTGCTATACTCATCCTGAGAAGCTTCCAGGAGTAAGCAAAGATGGTCTGGTGCGCCATTTCTTTCACAGGCCATCGAAAGCATACACGACAGGAACAAGGAAAAGGAGGAAGGTGCACACTGATGACGTGGACGGGAGCGAGACACGTTGGCACAAGACAGGGAAGACGAGGCCAGTGTATCTGAGTGGGAAGCTAATAGGCTACAAGAAGATTCTTGTGCTTTACACAAACTATGGTAAGCAAAGAAAGCCAGAGAAGACGAACTGGGTAATGCATCAGTACCACCTGGGATATAACGAAGAAGAGAAAGAAGGAGAGTTAGTTGTGTCCAAGGTTTTCTATCAAACACAACCTCGCCAATGTGGTTCCTTGCTCATGAAAGATCAGTCAATGAATCCTGCAAAACTCAAAACTCAGGCCATGTACGAGGCTGCTGCAAATAATCATAAGAACAATAATAATAGGTTCGTTGAGTTCTATGGTTCTTCTTTCTTGTCGTTTGATCAAGGAAACGAACACAACAGGTCTAGTAATTCTCAAGTGATCTCCCATTTTCCTGTTCAGGATGGTTCTTCTTTCAATATTCCATGA 897 0.4292 MIFRRLYEEQIMTQCNDSENNIIVDKREDSLITTTCPSCGHHIKSHEQAGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHTDDVDGSETRWHKTGKTRPVYLSGKLIGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGYNEEEKEGELVVSKVFYQTQPRQCGSLLMKDQSMNPAKLKTQAMYEAAANNHKNNNNRFVEFYGSSFLSFDQGNEHNRSSNSQVISHFPVQDGSSFNIP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0753 298 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 22 264 IPR044799 GO:0003700
Lele10g0753 298 SUPERFAMILY NAC domain 51 217 IPR036093 GO:0003677|GO:0006355
Lele10g0753 298 Pfam No apical meristem (NAM) protein 58 198 IPR003441 GO:0003677|GO:0006355
Lele10g0753 298 Gene3D NAC domain 66 221 IPR036093 GO:0003677|GO:0006355
Lele10g0753 298 FunFam NAC domain-containing protein 73 66 221 - -
Lele10g0753 298 MobiDBLite consensus disorder prediction 130 151 - -
Lele10g0753 298 MobiDBLite consensus disorder prediction 136 151 - -
Lele10g0753 298 ProSiteProfiles NAC domain profile. 57 217 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0753 Lele-ChrLele10 5797965 5799752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0753 12 225 NAC Transcription Factor Family AT4G28500 75.330 2.45e-123 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele10g0753 NAM 1.5e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0753 10 5797965 5799752 Lele10g0753 10 5797965 5799752 ECH
Lele10g0753 10 5797965 5799752 Lele11g0835 11 8398452 8400234 hybridization
Lele10g0753 10 5797965 5799752 Lele12g0517 12 13438241 13440029 hybridization