LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele10g0747	ATGGACGATAGTTCTGAGAACAAATATGGATCTTCCTCTGACCCATCCATGAAAAATAAGGTGAAACAATTGGTTGATGATCTTCAAGGAATCTTCACCAAGCTTCGATCTGCAAGAGAGGAGAATAGGTCTAATGATATAGTTATCTTTGAGGAGCAGGTGCATCATACGCTCCAAGAGTGGGAAACAGAATTAAACAAGCCATCTCCAGCTTCTTCCTTAGCTGATGGAAATCTTGGATTATTTTCAGAGGAATTGGCCCAACTTTTGCAAGATATTGAGGAGGAAGAAGATGCCACTAGTGAACTGGCAAAGAGTGCACCATTGAAGACTGAGCCAGATCTTCATAACACCAATGAAACCAGTTATTCATCATTTCAGGAAAAGAGTTCTGATGAGAACCAACAAGGTCATGCTCTGGAAGACTTTTACCAAGATGAAGGCGCTACTTCAACTCCAAAGAGCCAAAATGCTGTTAATAGCTTAGATATGATTACTCAATCAGATAACCATGAACCCAGTTTAAATCAAGATGTAAATTACTTCATAGGAGGTCATAAATCTGATTTGATTGAACAATGTGATATATATCAGGAATGCATGCAAAACTTAGCAATAAAAAGCACAGAGCCGGATCTATTTATTTTAGATGAGGATTTTGATTGGAATGTGTTTGTCGGACCTGATGATGTCCAACAGTCTGGAGAGGATTTTTCGCCTAATGTTCTTCCAAATATATGCCCTCCGCCTTCTGCATTTTTAGGCCCAAAATGTGCCTTATGGGATTGCTTTAGGCCGGCTCAGGGGTTAAAATGTTGCCAGGACTACTGCTGTAGTTCTCATGAGCTTTTGGCTAACAAAGAGGGTCTTCCTGGCATGACTCCAATTTTGCGTCCTCGGGGCATTGGTGTTAAGGATGGTCCTTTGTTTGCTGCTGTTAATGCGAAGATACTGGGTAAGGACGTGGGCATCCCTAATTGTGAAGGTGCTGCTTCAACTAAATCCCCCTGGAATGCTCCTGAGTTATTTGATCTTTCTCTTTTCGAGGGTGAAACTGTGCGGGAATGGCTTTTTTTTGACAAGCCAAGAAGGGCTTTTGACAGTGGAAATAGAAAACAAAGATCACTCCCAGATTACAGCGGACGTGGTTGGCATGAATCAAGGAAGCAAGTGATGAAGGAATATGGGGGACAGAAGAGGTCCTATTACATGGACCCTCAGCCTCTGAGTTATCTTGAGTGGCATTTGTATGAATATGCGGTCGATAAGCATGATGGGTACGCATTATACAGACTTGAATTAAAGCTTGTGGATAAAAAGAAGAGTCCTAAAGGAAAAGTTACCAAGGAATCTCTTGCTGATATACAGAACAAGATGGGAAAGCTAACTGCCGATGTTCCAGAAAAAAAATGA	1413	0.414	MDDSSENKYGSSSDPSMKNKVKQLVDDLQGIFTKLRSAREENRSNDIVIFEEQVHHTLQEWETELNKPSPASSLADGNLGLFSEELAQLLQDIEEEEDATSELAKSAPLKTEPDLHNTNETSYSSFQEKSSDENQQGHALEDFYQDEGATSTPKSQNAVNSLDMITQSDNHEPSLNQDVNYFIGGHKSDLIEQCDIYQECMQNLAIKSTEPDLFILDEDFDWNVFVGPDDVQQSGEDFSPNVLPNICPPPSAFLGPKCALWDCFRPAQGLKCCQDYCCSSHELLANKEGLPGMTPILRPRGIGVKDGPLFAAVNAKILGKDVGIPNCEGAASTKSPWNAPELFDLSLFEGETVREWLFFDKPRRAFDSGNRKQRSLPDYSGRGWHESRKQVMKEYGGQKRSYYMDPQPLSYLEWHLYEYAVDKHDGYALYRLELKLVDKKKSPKGKVTKESLADIQNKMGKLTADVPEKK	470

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele10g0747	470	MobiDBLite	consensus disorder prediction	1	21	-	-
	Lele10g0747	470	MobiDBLite	consensus disorder prediction	94	135	-	-
	Lele10g0747	470	Coils	Coil	79	106	-	-
	Lele10g0747	470	MobiDBLite	consensus disorder prediction	112	133	-	-
	Lele10g0747	470	PANTHER	TRANSCRIPTION FACTOR VOZ1	1	468	IPR039277	GO:0006355\|GO:0048578

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele10g0747	Lele-ChrLele10	5756451	5759207	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele10g0747	11	467	VOZ-9 Transcription Factor Family	AT1G28520	51.310	1.08e-151	439

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	VOZ	Lele10g0747		None	None	None