Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0743 ATGGCGCAATTGCCTCCCAAGATCCCAAACATGGCGCCCAATTGGCCTGATTTTTCTTCTCATCATCAGAAGATGCCTTCCCTTGCAAGTTTGTCGCCAAATAATGTGGCCGCCGCGACCACCAACGCGGCTTCTACCGCCACCCACCAGAATCCTTCTTGGGTGGATGAATTCCTCGACTTCTCGTCGGCCCGACGAGGGGCTCACCGGCGATCCGTGAGCGACTCCATTGCCTTCATTGAGGCGCCAATGCTGGACTATTGTCGTGGTAACTCCGGCGTGATTCCTCCGAGGTCGTCTGAGTTCGATAGATTTGATGATGACCAATTCATGTCTATGTTCACTGACGGTTTATCCGGCTCTACAATGCCTCGCACTATGTCGTCCTCGAATCCTTCAAGCCCTTCTGATCATAACAGCATTAATGATGAGAAAGAAACCGGCCAAAACCTGAACCAACCGAAGGAGACGAAGGAGAAGAAAGAGCACGCTCAGCAGCAGAGACAAGTGAAGAATGAATCAGATGAGGTTGAAAGCCAACATGAACAGGAAACTCAAGCTCCAAATAACACCAACACAACTTCTTCCGCTGACAAAATCACTGATCCTAAGAGAGTGAAAAGAATCCTGGCAAACAGACAATCTGCACAAAGGTCACGAGTGAGGAAGTTGCAATACATATCAGAGCTTGAACGAAGTGTAACTTCATTACAGGCCGAAGTTTCAGTGCTATCTCCAAGAGTTGCGTTTTTAGATCATCAACGATTGCTTCTAAATGTTGACAACAGTGCTCTGAAGCAAAGAATCGCCGCCCTTGCACAGGACAAGATCTTTAAGGATGCTCATCAAGAGGCTCTGAAGAGGGAGATAGAGAGACTAAGGCAAGTATATCACCATCAGAACCTCAAGAAAATGGAAAATAATGCTGCAGGGCCATCATCACCATCCTCATCTCCAACACCAAACACAGGATGTGCTGCTAAGACTACAGAAAACGAACAACTTCTCAATGTCTGA 1017 0.4739 MAQLPPKIPNMAPNWPDFSSHHQKMPSLASLSPNNVAAATTNAASTATHQNPSWVDEFLDFSSARRGAHRRSVSDSIAFIEAPMLDYCRGNSGVIPPRSSEFDRFDDDQFMSMFTDGLSGSTMPRTMSSSNPSSPSDHNSINDEKETGQNLNQPKETKEKKEHAQQQRQVKNESDEVESQHEQETQAPNNTNTTSSADKITDPKRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPRVAFLDHQRLLLNVDNSALKQRIAALAQDKIFKDAHQEALKREIERLRQVYHHQNLKKMENNAAGPSSPSSSPTPNTGCAAKTTENEQLLNV 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0743 338 Gene3D - 203 274 - -
Lele10g0743 338 Coils Coil 283 303 - -
Lele10g0743 338 SUPERFAMILY Leucine zipper domain 204 258 IPR046347 GO:0003700|GO:0006355
Lele10g0743 338 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 207 222 IPR004827 GO:0003700|GO:0006355
Lele10g0743 338 Coils Coil 160 183 - -
Lele10g0743 338 FunFam Basic leucine zipper 61 203 276 - -
Lele10g0743 338 MobiDBLite consensus disorder prediction 139 182 - -
Lele10g0743 338 MobiDBLite consensus disorder prediction 183 199 - -
Lele10g0743 338 PANTHER BASIC LEUCINE ZIPPER 34 1 322 - -
Lele10g0743 338 CDD bZIP_plant_RF2 205 255 IPR044759 GO:0003700|GO:0006355
Lele10g0743 338 Pfam bZIP transcription factor 204 248 IPR004827 GO:0003700|GO:0006355
Lele10g0743 338 MobiDBLite consensus disorder prediction 114 138 - -
Lele10g0743 338 MobiDBLite consensus disorder prediction 306 338 - -
Lele10g0743 338 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 202 254 IPR004827 GO:0003700|GO:0006355
Lele10g0743 338 MobiDBLite consensus disorder prediction 113 205 - -
Lele10g0743 338 SMART brlzneu 200 264 IPR004827 GO:0003700|GO:0006355
Lele10g0743 338 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0743 Lele-ChrLele10 5721475 5723825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0743 1 281 bZIP Transcription Factor Family AT3G58120 58.804 1.44e-97 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele10g0743 bZIP_1 4e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0743 10 5721475 5723825 Lele10g0743 10 5721475 5723825 ECH
Lele10g0743 10 5721475 5723825 Lele11g0819 11 8295750 8298055 hybridization
Lele10g0743 10 5721475 5723825 Lele12g0525 12 13553978 13556322 hybridization