Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0722 ATGGACTCCCTCGCGGGAGCTCCGTCACCCCCCTCCACTGCTCCTTCCCGGTCGTCGCCGTTTCCCGGACGGGAGGACTGCTGGAGTGAGGACGCCACCTTCACTCTCATCGATGCTTGGGGTGAACGTCACCTTGAGCTTAATCGAGGAAACCTCCGTCAGAAGCACTGGCAAGGGGTCGCCGACGCCGTTAACGCCAATCATGGCCACGTGAAGAAGGCGCGCCGAACCGACGTCCAGTGCAAGAACCGCATCGACACTCTGAAGAAGAAGTACAAGATCGAGAAGAGCAAGGTCATGGATTTCGACGGGAACTACACTAGCCCTTGGCCCTTCTTCGCCCGCCTTGACGCTCTCATCGGCGATGTGTTTCCAGTGAAGAGACTTCCGCCGGCGATCGACAGTAACCGCAGTAGCTCCCCTCCCTCGAAGTCTCCGGCATGGGTAATCTCACAGGTGCCTGTCGGCCGCCGATCCGGCACTCAGAAACGGCCGGCGATGGCGCCGGCGAGCATGAACGATTCGTCTTTCCGTCGGAACTTCTCAGCTTTTGCAGCGGCAGCTGCAGCAGCATCCGAGGCAGGGGATGCAAATAGTGACGATTCGGATGAGTCAAGGTCAAGTACTGCCACCGGAAGTAGGAAGAGAGGAAGAGAAAGAGAGAAAAAGAGGGAAAACGATAGGGATTCAGAATTTGGGTACAGAGAACTGGCACGAGCAATAGAGAGGTTCGGGGAGATATACGAGAGAGTAGAGGCGGCGAAGCAAAGGCAAATGGTGGAGTTAGAGAAACAGAGAATGCAATTTGCTAAGGATTTGGAGTACCAGAGGATGGAGCTTTTCATGGAAACGCATGTTCAGCTTCAAAAAATCAAGCGCACCAAGCGATCTTCTCAGGGCTGGGAAGAAAATGGGAACTTGATAACAGTATCATTTTTGTGTATGCGTTCATTTGGGAATTCCTCAAGTTAG 972 0.5412 MDSLAGAPSPPSTAPSRSSPFPGREDCWSEDATFTLIDAWGERHLELNRGNLRQKHWQGVADAVNANHGHVKKARRTDVQCKNRIDTLKKKYKIEKSKVMDFDGNYTSPWPFFARLDALIGDVFPVKRLPPAIDSNRSSSPPSKSPAWVISQVPVGRRSGTQKRPAMAPASMNDSSFRRNFSAFAAAAAAASEAGDANSDDSDESRSSTATGSRKRGREREKKRENDRDSEFGYRELARAIERFGEIYERVEAAKQRQMVELEKQRMQFAKDLEYQRMELFMETHVQLQKIKRTKRSSQGWEENGNLITVSFLCMRSFGNSSS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0722 323 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 9 296 IPR044823 -
Lele10g0722 323 MobiDBLite consensus disorder prediction 1 24 - -
Lele10g0722 323 Gene3D - 28 94 - -
Lele10g0722 323 MobiDBLite consensus disorder prediction 134 173 - -
Lele10g0722 323 MobiDBLite consensus disorder prediction 199 229 - -
Lele10g0722 323 FunFam trihelix transcription factor ASIL2 28 94 - -
Lele10g0722 323 MobiDBLite consensus disorder prediction 192 229 - -
Lele10g0722 323 Coils Coil 248 268 - -
Lele10g0722 323 Pfam Myb/SANT-like DNA-binding domain 25 119 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0722 Lele-ChrLele10 5519419 5520611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0722 187 293 Trihelix Transcription Factor Family AT3G14180 42.991 6.46e-18 82.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele10g0722 Myb_DNA-bind_4 9.7e-24 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0722 10 5519419 5520611 Lele10g0722 10 5519419 5520611 ECH
Lele10g0722 10 5519419 5520611 Lele11g0799 11 8079969 8080985 hybridization
Lele10g0722 10 5519419 5520611 Lele12g0543 12 13761516 13762717 hybridization