Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0721 ATGTCTCCTTTTTACGTTGGTGAGAGGCAGAGGACGAAGGTGTGGATTTTTCTCCGGGGATATCCGGACGGTGAGGCGCTTGATGCGGAGGAATTGAGATTTAAATGCTATTGGGTGAAATACGTGATTCGGGGTCTAATGCTTGGATCTGCTGGCGGTCATATGGCCTCCAGCTTGAAGCAAGACATGGCGGAGACACGAGAAGATTCAGTGCCTGCAGAGCAAGGGCCCTCTAATGCTTCATGGTGGACTTCAGATTTCATTGAAAAATTTGGATCTGTTTCTCTGGGATCTCAAGATGAGGCCTTAAACAATAAAGAATCACCTAGATATTCAGAGCAAGGTGATTTGTCACCTTATAGAGCATCTCAAATTCTCTGGCGTACTGGAATGCTTTCAGAACCAATACCAAATGGGTTTTATTCTGTCATACCGGAGAAAAGACTCAAGGAACTTTTTCATAATATTCCTACTTTGGAAGAGCTTCTCGCTTTAGGAGGAGAGGGTTTTAGGGCTGATATCATTCTTGTGGATTCAGAAAAAGATAAAAGGCTATCCATGTTGAAGCAGCTGGCGCTGGCACTAGTAAAAGGATTGAACTCAAATCCAGCTGCAGTTATTAAGAAAATAGCAGGATTAGTTTCTGATTTTTACAAGCGGCAAAATGTAGAAAGTCCAGCAAAAGCTGCACTGGAAGAAACCTCCCACATGTTTGAGAATCTAAGTGTCCAGTTGCTGGGGCAGATAAAGCATGGTTCATGCCGTCCTCGAGCAATCTTATTTAAAGTTTTAGCAGATACTGTAGGACTTGAAAGTAAACTAATGGTGGGTTTGCCAAACGATGGGGTCCCTGAATGTGCAGATTCATACAAGCATTTGTCTGTCGTAGTGGTATTAAATTCTGTGGAGCTATGGGTTGATCTCATGCGATTCCCTGGCCAATTATATTCACAATCAACCAAGGCAATTTTTATGACGCATATTTCTGCAGCAGGAGAGAGTGATTCTGCGGAGAATGATTCCTGTGATTCGCCATTAGAACCCAACAGTCCTTTATATGGGGTTTCAGAGAGAGTAGATATTGACAGTGCTGAAAGAGAGGAAAATCTCCTATTTCACAGAAGACATGAAGCATCTTCAAATTTATCAGGCATTTCTTTGCGGAATTCTATGTTACGTTCAAATGTCATTCTGGACAATAAATTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGCCGGCGTAGTCGGAGAAGGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCACGGGCGCGGTCCATGCTTAGCGGTGATAGGAAAACATTTAGAGGTTTTGCTGATGACCGAGCTACATCAAGCTATAGGTCAGATGGTGCTCCCTCATCAGAAGCTCGTAGGATCAGAAGAAGAAGCATCAGCATTACACCAGAAATTGGTGACGATATCGTAAGGGCTGTACGGGCAATGAATGAAACACTAAAGCAGAATCGTCTTTTGAGGGAGCAGAGGGATGATCCATCCTTCTCGCATTCTCCAACTGATAGAAGTAGCGGTGGTAATCTTGAGAAAAATGTTTCAAATTTCCATCTTGGTCATGATGAAAGCTCTGCTTTATATTCTCTTAAGCATGACCAAGAAACTTCTCAAAAGGCAATGTCATTACCCTCTTCACCACATGAATATAGGGGTGAAGCATCTGGGAGAAGTGGACCATCAGGATATGGAGTAAGTAATGAGCTCCAAGCAACATGGCACAAAGTCCTCGAGTCGCCGATGTTCAATAATAAACCTCTGTTACCATATGAAGAATGGAATATTGATTTCTCAGAACTAACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTATTCCGAGGCATATGGAATGGAACAGATGTTGCCATAAAGGTTTTTCTGGAGCAAGATTTAACAACTGAAAACATGGAAGATTTCTGCAATGAGATAACAATTCTCAGCCGGCTTCGACATCCTAATGGTACACATCAACTTCTACTTACTATTCTTATTTTATTTCTTGGTGCATGCACAAAGCCTCCACATTTGTCAATGGTTACTGAGTATATGGAGATGGGATCTTTGTATTACTTGATCCATTCGAGTGGTCAAAATAAGAAGCTTAGTTGGCGGAGAAGACTAAAGATGTTACGGGATATATGCAAGGGGTTGATGTGCATACATCGGATGAAGATAGTTCACCGTGACCTGAAAAGTGCCAATTGTCTTGTGAATAAGCATTGGACTGTGAAGATCTGTGATTTTGGGCTTTCAAGAATAATGACAGATTCTCCCATGAAAGATTCTTCATCAGCGGGAACTCCTGAGTGGATGGCTCCTGAACTTACTCGAAATGAACCATTCACGGAAAAATGTGACATCTTTAGCCTGGGGGTGATAATGTGGGAGCTCTGCACTTTAAATAGGCCCTGGGAAGGTGTACCGCCAGAGAGGGTAATTTATGCCGTTGCTAATGAGGGATCCAGACTGGAGATTCCTGAAGGTCCACTGGGCAGGCTGATTTCAGATTGTTGGGCAGAACCTCATGAACGGCCAAGTTGTGAAGGCATCCTTTCTCGCTTGCTTGACTGCGAATACTCGTTGTGCTAA 2667 0.4304 MSPFYVGERQRTKVWIFLRGYPDGEALDAEELRFKCYWVKYVIRGLMLGSAGGHMASSLKQDMAETREDSVPAEQGPSNASWWTSDFIEKFGSVSLGSQDEALNNKESPRYSEQGDLSPYRASQILWRTGMLSEPIPNGFYSVIPEKRLKELFHNIPTLEELLALGGEGFRADIILVDSEKDKRLSMLKQLALALVKGLNSNPAAVIKKIAGLVSDFYKRQNVESPAKAALEETSHMFENLSVQLLGQIKHGSCRPRAILFKVLADTVGLESKLMVGLPNDGVPECADSYKHLSVVVVLNSVELWVDLMRFPGQLYSQSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSERVDIDSAEREENLLFHRRHEASSNLSGISLRNSMLRSNVILDNKLSLSHSEPNIATAFGRRSRRRVIAEQRTASSSPEHPSFRARARSMLSGDRKTFRGFADDRATSSYRSDGAPSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQRDDPSFSHSPTDRSSGGNLEKNVSNFHLGHDESSALYSLKHDQETSQKAMSLPSSPHEYRGEASGRSGPSGYGVSNELQATWHKVLESPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEITILSRLRHPNGTHQLLLTILILFLGACTKPPHLSMVTEYMEMGSLYYLIHSSGQNKKLSWRRRLKMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTDSPMKDSSSAGTPEWMAPELTRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVIYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEGILSRLLDCEYSLC 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0721 888 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 358 880 - -
Lele10g0721 888 ProSitePatterns Protein kinases ATP-binding region signature. 629 650 IPR017441 GO:0005524
Lele10g0721 888 MobiDBLite consensus disorder prediction 423 480 - -
Lele10g0721 888 FunFam Serine/threonine-protein kinase isoform 1 613 710 - -
Lele10g0721 888 MobiDBLite consensus disorder prediction 506 539 - -
Lele10g0721 888 Gene3D Phosphorylase Kinase; domain 1 614 710 - -
Lele10g0721 888 SMART serkin_6 623 881 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0721 888 ProSiteProfiles Protein kinase domain profile. 623 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0721 888 MobiDBLite consensus disorder prediction 59 81 - -
Lele10g0721 888 Gene3D Transferase(Phosphotransferase) domain 1 711 886 - -
Lele10g0721 888 SUPERFAMILY Protein kinase-like (PK-like) 596 880 IPR011009 -
Lele10g0721 888 MobiDBLite consensus disorder prediction 506 522 - -
Lele10g0721 888 Pfam Ethylene-responsive protein kinase Le-CTR1 121 315 - -
Lele10g0721 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Lele10g0721 888 MobiDBLite consensus disorder prediction 555 586 - -
Lele10g0721 888 Pfam Protein tyrosine and serine/threonine kinase 624 879 IPR001245 GO:0004672|GO:0006468
Lele10g0721 888 CDD STKc_MAP3K-like 629 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0721 Lele-ChrLele10 5503670 5518173 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0721 63 888 MAP Kinase Kinase Kinase AT3G58640 69.686 0.0 1170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lele10g0721 PK_Tyr_Ser-Thr 1.1e-55 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0721 10 5503670 5518173 Lele10g0721 10 5503670 5518173 ECH
Lele10g0721 10 5503670 5518173 Lele11g0798 11 8065803 8076839 hybridization
Lele10g0721 10 5503670 5518173 Lele12g0544 12 13764483 13781834 hybridization