Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0716 ATGTCTAGAGTTGGGCATATTAGTCAGGATTGGGAGCCGGTGGTGATCCGGAAGAAAGATCCGACCGCCATCGCCAAGAAGGACCAGAAATCCGTCAATGCAGCTCGCCGCGCTGGCGCCGAGATCGAGACCGATAATGCTGGGTCAAACCAGGCTGCTTCTAGTAAAACTTCACTGAACACTAAGACGCTGGATGAAGATACGGAGAATCTAGTTCATGAACGTGTGCCAACTGAACTCAAGAAAGCTATTATGCAACCTCGGATGGACAAGAAACTTACCCAGTCACAGCTTGCTCAGTTAGATATTTTATATGATTGTGTGATAACTACTTTGCAGATGATCAATGAGAAACCTCAAGTGATTCAGTAG 372 0.4651 MSRVGHISQDWEPVVIRKKDPTAIAKKDQKSVNAARRAGAEIETDNAGSNQAASSKTSLNTKTLDEDTENLVHERVPTELKKAIMQPRMDKKLTQSQLAQLDILYDCVITTLQMINEKPQVIQ 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0716 123 Gene3D - 68 103 IPR010982 GO:0003677
Lele10g0716 123 MobiDBLite consensus disorder prediction 22 73 - -
Lele10g0716 123 MobiDBLite consensus disorder prediction 44 61 - -
Lele10g0716 123 Pfam Multiprotein bridging factor 1 9 76 IPR013729 -
Lele10g0716 123 PANTHER ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1 9 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0716 Lele-ChrLele10 5448834 5451059 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MBF1 Lele10g0716 MBF1 2.3e-16 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0716 10 5448834 5451059 Lele10g0716 10 5448834 5451059 ECH
Lele10g0716 10 5448834 5451059 Lele11g0790 11 8005798 8008140 hybridization