Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0710 ATGTTGGGTTTGGAGTATCAGTCAAAGAGGGGCTACTTAGGATTGGAATATTACGGAAGGACTATAAGTATTAAGATTATGCCAGTTGGGGTTCACATGGATCGTATTAAAACAGTCATGAAAATGGCAGAAAAAGAGTCTAGAGTAAAGGAGCTGAAACAGCAATTTGAAGGAAAAACTGTCTTGCTTGGTGTTGATGATATGGACATTTTTAAAGGTATTGATTTGAAGATTTTGGCTATGGAGCAGATGCTTAGTCAACATCCTAAATGGCAAGGAAGAGCTGTTTTGGTCCTGATAGTAAATCCTTCTAGGGGTAATGGTATACATCTAGAGGGCATATGGCCTGGCATTCAAGAAAGCTGCAACAGGATCAACAGAGTATTTGGACGTCCTGGTTATGAACCTATTGTATTTATAGATAGACCAGTTTCAGTTGCAGAAAAAGCTGCTTATTATAGCATTGCTGAATGTGTTGTTGTCACAGCTGTAAGAGATGGGATGAACCTAACTCCTTATGAATATATTGCTTGTAGACAGGAAATGCCTAGTTCTGAATCATGCACTAATGCCAATGGGTCAAAGAGCATGCTTGTGATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCTATCCGTGTTAATCCATGGAATGTTGAAACAACTGCAGAGGCAATGAATGAGGCCATCTCAATGGCTGATGGAGAGAAGCAGTTGCGGCATGAAAAGCATTATCGTTATGTTAGCACCCATGATGTCGCTTATTGGTCACGTAGTTTCTTGCATGATATGGAGAGGGCTTGCTCAGACCTTCTGCGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTCAGAGTTGTGGCACTTGATCCTAATTTTAGAAAGCTCTCCATTGATGCTATGGTTTCAGCCTACAAGAGGGCGAAGAGTAGGGCCATTTTGTTGGACTATGATGGCACTGTTATGCCACAGAACTCTATTAATAAGATTCCAAGCCCAGAGGTCGTCTCTTTTTTGAACACACTCAGTGCAGACTCCAAAAATGTAGTTTTCATTGTTAGTGGGAGGGGGAGGGATAGTTTAAGCAACTGGTTTACTCCCTGCAAAAAAATTGGAATTGCTGCAGAACATGGATACTTCTTGAGGTGGTCTCAGTGTGAAGAATGGGAAATTTGTGGAAAGAGCTCTGATTTTGGCTGGATGCAGATTGCTGAACCTGTAATGAAACTATATACAGAGGCAACTGATGGTTCTGGCATTGAAAAAAAGGAAAGTGCTTTGGTATGGCAATACCGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCCAAGGAAATGTTAGATCATCTAGAAAGTGTTTTAGCCAATGAGCCTGTTGCTGTGAAGAGTGGTCAGTTCATTGTGGAAGTAAAGCCCCAGGATGTGAGCAAAGGCTTAGTTGCAGAAAAGATCTTTTCATCAATGGATGAACAAGGGAAACAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGATATGTTTGAAATAATTAGTAGTGCCATCTCTAGAAATATTCTTTCTGCCAATTGTGCCGTATTTGCTTGCACAGTTGGACAAAAACCGAGCAAAGCTAAGTATTATTTGGATGATACGACTGAAGTCATTAGCATGCTAGAATCTTTAGCTGAAGAATCTGATTCTGCTTAG 1707 0.4112 MLGLEYQSKRGYLGLEYYGRTISIKIMPVGVHMDRIKTVMKMAEKESRVKELKQQFEGKTVLLGVDDMDIFKGIDLKILAMEQMLSQHPKWQGRAVLVLIVNPSRGNGIHLEGIWPGIQESCNRINRVFGRPGYEPIVFIDRPVSVAEKAAYYSIAECVVVTAVRDGMNLTPYEYIACRQEMPSSESCTNANGSKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMADGEKQLRHEKHYRYVSTHDVAYWSRSFLHDMERACSDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRAKSRAILLDYDGTVMPQNSINKIPSPEVVSFLNTLSADSKNVVFIVSGRGRDSLSNWFTPCKKIGIAAEHGYFLRWSQCEEWEICGKSSDFGWMQIAEPVMKLYTEATDGSGIEKKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAEKIFSSMDEQGKQADFVLCVGDDRSDEDMFEIISSAISRNILSANCAVFACTVGQKPSKAKYYLDDTTEVISMLESLAEESDSA 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0710 568 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 313 430 - -
Lele10g0710 568 FunFam Trehalose-6-phosphate synthase 2 397 476 - -
Lele10g0710 568 Gene3D - 441 568 IPR023214 -
Lele10g0710 568 Gene3D - 313 417 IPR023214 -
Lele10g0710 568 SUPERFAMILY HAD-like 314 562 IPR036412 -
Lele10g0710 568 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 2 270 - -
Lele10g0710 568 TIGRFAM T6PP: trehalose-phosphatase 311 562 IPR003337 GO:0003824|GO:0005992
Lele10g0710 568 CDD HAD_TPP 315 554 - -
Lele10g0710 568 FunFam Alpha,alpha-trehalose-phosphate synthase 39 251 - -
Lele10g0710 568 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 443 568 - -
Lele10g0710 568 Pfam Glycosyltransferase family 20 1 267 IPR001830 GO:0003824|GO:0005992
Lele10g0710 568 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 316 518 IPR006379 -
Lele10g0710 568 Gene3D Glycogen Phosphorylase B; 33 251 - -
Lele10g0710 568 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 563 IPR001830 GO:0003824|GO:0005992
Lele10g0710 568 Pfam Trehalose-phosphatase 317 551 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0710 Lele-ChrLele10 5402558 5405824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0710 1 568 Trehalose Biosynthesis Gene Families AT1G06410 76.232 0.0 904