Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0701 ATGTGTTTATGTTGGTCAGGTGAAGGAGGTGATTCTAATGTTCTCATTGATAGTTTTGTTGCTTTTGAGGTTGCTATATTCATTTTGATAGTATGGCTTTTCTATGCTGCAATCGGAGTTGGATTCTCATCTTTTGTTGAAGGAATGTGTTGGGCAAGAACTGCAGAGAGACAGACTTCTAGAATGAGAGTGGAATACCTGAAATCAGTACTTCGACAAGAAGTCGGTTTCTTCGATACTCAGGCAGCAGGTTCTTCAACAACTTACCGAGTTGTCTCCCTCATTACAGCTGATGCCAACTCAATTCAAGATGCTTTAAGGGAAAAGAGACCAAACTTACTTGCCAGCATGTCAACATTTCTATGCTGCCACATCTTTGCACTTGTACTATCATGGAGGCTTACATTAGCAGCCACGCCACTCTCAGTCATGTTCATCGTTCCGGCACTCATATTCGGGAAGATCATGTTGGAACTAGCAATGAAAATGATTGAATCTTACGGCGTTGCTGGTGGGATTGCAGAACAAGCAATATCTTCAGTAAGAACTGTTTATTCATATGTGGGGGAGAATCAAACACTGAACAGATTCAGCAGTGCACTTGAGAAAACAATGAGATTGGGAATAAAGCAAGGTTTTGCAAAGGGACTGATGTTAGGAAGCCTTGGAGTTATATATATCAGTTGGGGTTTTCAGGCTTGGGTTGGAACTTTTCTAATCACTGAGAAAGGAGAACAAGGTGGCCATGTATTCGTAGCCGGCTTCAATGTTCTCATGGGAGGCCTGATGGTGAAGTTGCAGCAAGTAACAACAACACAAGATGAAGATTCCAGGAATTCCAATCTTCAAACCGAGGGAAGAAATCCTCGCCACAAGATGGGCATTCCACCAAGCCCGGCGAGTATCAGATCAAGCACACCGGGAACTCCAGTTTTATTTCCATTCAGTCAACCATTTTCCATGGGGAATTCATACTCAGTTCAATATGATCCTGATGATGATAGTTATGAAGATAACTTCAAAAGATCTACATATCCAGCTCCTTCGCAGTGGCGTTTGCTAAAGATGAATGCACCTGAGTGGGGAAGAGCAATTCTGGGATGCTTTGGTGCAATAGGCTCAGGAGCTGTACAACCAAGCAAATGCATTTTTTGTGGGAACACTTATCTCTGTCTATTTTGA 1182 0.4247 MCLCWSGEGGDSNVLIDSFVAFEVAIFILIVWLFYAAIGVGFSSFVEGMCWARTAERQTSRMRVEYLKSVLRQEVGFFDTQAAGSSTTYRVVSLITADANSIQDALREKRPNLLASMSTFLCCHIFALVLSWRLTLAATPLSVMFIVPALIFGKIMLELAMKMIESYGVAGGIAEQAISSVRTVYSYVGENQTLNRFSSALEKTMRLGIKQGFAKGLMLGSLGVIYISWGFQAWVGTFLITEKGEQGGHVFVAGFNVLMGGLMVKLQQVTTTQDEDSRNSNLQTEGRNPRHKMGIPPSPASIRSSTPGTPVLFPFSQPFSMGNSYSVQYDPDDDSYEDNFKRSTYPAPSQWRLLKMNAPEWGRAILGCFGAIGSGAVQPSKCIFCGNTYLCLF 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0701 393 MobiDBLite consensus disorder prediction 269 305 - -
Lele10g0701 393 Pfam ABC transporter transmembrane region 28 261 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele10g0701 393 PANTHER ABC TRANSPORTER B FAMILY 30 265 - -
Lele10g0701 393 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 29 259 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele10g0701 393 MobiDBLite consensus disorder prediction 269 287 - -
Lele10g0701 393 Gene3D ABC transporter type 1, transmembrane domain 12 389 IPR036640 GO:0005524|GO:0016020
Lele10g0701 393 SUPERFAMILY ABC transporter transmembrane region 25 259 IPR036640 GO:0005524|GO:0016020
Lele10g0701 393 CDD ABC_6TM_Pgp_ABCB1_D1_like 15 264 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0701 Lele-ChrLele10 5313373 5318641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0701 28 262 Calmodulin-binding Proteins AT2G36910 34.034 9.91e-35 134