Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0690 ATGAAGGAGGAATCAACGGGACTGATCATTGGGATTTCAATTGGTGTAGTTATTGGTGTCATTTTGGCTATTTCTGCACTTTTCTGTGTGAGATACCATAGGAAGCGATCGCAGATTGGGAATAGCAGTTCACGGCGGGCGGCTACGATACCTATCCGTACAAATGGTGCTGATTCTTGTACCATTCTATCGGATTCAACCTTAGGCCCAGAATCTCCTGTTAAGTCTACAAGTAGTGCTATGTCCTTCTCCTGGTTTGATGGCTTCAAGAGAAACAACGTGGTTTCAGCTTCTGGAATACCTGAGTATCCTTACAAGGATTTGCAGAAGGCGACTGGGAACTTTACAACACTTATAGGACAAGGTGCATTTGGTCCTGTTTATAAAGCTCAGATGTCCACCGGCGAGACCATTGCAGTTAAAGTTCTTGCAACTAATTCTAGGCAAGGAGAGAGAGAATTTCACACAGAGGTAATGTTGTTGGGAAGGCTGCACCATAGAAACCTGGTTAATTTGGTGGGATATTGCGCAGAGAAGGGACAACATATGCTTATATATGTATATATGAGCAAAGGCAGCTTGGCTTCCCACTTGTACAGTAAGGAGAATGGAACAATGAGCTGGGATTTGAGAGTTCACATTGCTCTAGATATAGCGAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCTCCAGTAATCCACAGAGATATCAAGTCTTCTAACATTTTGCTAGACCAGTCTATGAGAGCCAGGGTAGCTGATTTTGGACTGTCAAGAGAAGAGAAGGTGGACAAGCATGCAGCCATAAGAGGCACCTTTGGTTATCTAGACCCAGAGTACATATCCTCAGGAACATTCACCAAGAAAAGTGATGTGTACAGTTATGGAGTGTTGCTTTTTGAACTCATAGCAGCCAGAAATCCTCAACAAGGTCTCATGGAGTTAGTTGAGCTAGCGGCGATGAACAGTGGGGGGAGAATGGGGTGGGAGGAGATAGTGGATTCTGCATTAGAAGGTGAATATGATGGAGAGGAGCTGAATGAAGTAGCAGGGCTCGCATACAAATGCATAAACAGAGCCCCAAGAAAGAGACCTTCCATGAGAGACGTGGTTCAAGTGCTCACAAGGATTCTTAAAACAAGAAACGGTAAAAACCGTCACAGGAAGGGATTGTCTACTACAGCAGATGAAGTTTCCATTGATGTGGATCACCCTGAAGCAACTATTCATTGCAGACAAGAATCTATGGATAGTGCAGCTGACACCTATGAAGTGTAG 1281 0.4434 MKEESTGLIIGISIGVVIGVILAISALFCVRYHRKRSQIGNSSSRRAATIPIRTNGADSCTILSDSTLGPESPVKSTSSAMSFSWFDGFKRNNVVSASGIPEYPYKDLQKATGNFTTLIGQGAFGPVYKAQMSTGETIAVKVLATNSRQGEREFHTEVMLLGRLHHRNLVNLVGYCAEKGQHMLIYVYMSKGSLASHLYSKENGTMSWDLRVHIALDIARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVADFGLSREEKVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSYGVLLFELIAARNPQQGLMELVELAAMNSGGRMGWEEIVDSALEGEYDGEELNEVAGLAYKCINRAPRKRPSMRDVVQVLTRILKTRNGKNRHRKGLSTTADEVSIDVDHPEATIHCRQESMDSAADTYEV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0690 426 MobiDBLite consensus disorder prediction 406 426 - -
Lele10g0690 426 ProSiteProfiles Protein kinase domain profile. 113 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0690 426 FunFam calcium/calmodulin-regulated receptor-like kinase 1 189 397 - -
Lele10g0690 426 PANTHER OS01G0750732 PROTEIN 4 384 - -
Lele10g0690 426 SMART serkin_6 113 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0690 426 Gene3D Phosphorylase Kinase; domain 1 83 188 - -
Lele10g0690 426 CDD STKc_IRAK 119 378 - -
Lele10g0690 426 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 87 188 - -
Lele10g0690 426 Gene3D Transferase(Phosphotransferase) domain 1 189 401 - -
Lele10g0690 426 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Lele10g0690 426 SUPERFAMILY Protein kinase-like (PK-like) 101 381 IPR011009 -
Lele10g0690 426 Pfam Protein tyrosine and serine/threonine kinase 116 375 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0690 Lele-ChrLele10 5214382 5216957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0690 99 375 Receptor kinase-like Gene Family AT3G19300 43.706 1.23e-72 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Lele10g0690 PK_Tyr_Ser-Thr 7.3e-52 CL0016