Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0688 ATGGATTCGCAGCAGCTGTTCAGTTTTAGTGTGACTGGGTCAGGGATTCCATTCACGCCTTCTTATTCCACCATCCCATCACTACCTACAAGGTTTCTTGGATCCTTGAAGTTTGAAACAGGAAACTCACCTAATTCTCCCTTTTCTACTCAATTTGATTCTGATTCTCTCTCTAATTTGAGCGACGGCCAGGAGCAACAACACGGCTCTGGGGAGATTCTTTCTGGTTTCAGCCCTTCATATAACTCTTCTCTGGAAACTAATTACTACTTAAACAGTTCAATCTCACCTGTGGACCGTCTCCAAGATAGTCTGCATCCGTATTTTGCTAGGAGCTCTCTTGCACAGGATGCAAGTTCCAGCCAAAAGATTAGGCACGCTTTGCTGGAGTTAGAGTCTGCTCTGATGGCCCCTGATGATGGTGATGTAGTTACCACATCAAATACTTCTTTGAGTGGGAATAACAGACCTACAACTTCTGGCCAAAGATATGGTTCTTGGAGCCAGGAGCGTCAAGAGTCACAATATGTTCAAAGCCAGCCATCTTTTTTCACTAGCATTAGGCAGTCAAATGAAGTTGCGCACGTAGAGAAGCGTCACAAAGTAATGGAGGAAGCATGGCTCCAGGGCTTCCCGCCTAGCGGTTTAAAAGAATTGTTGATTGCTTGCGCCAAAGCCCTCTCTGAAGGCAACATGAAAGTTTTTGATGAGTTGATTGAAAAGGCTAGAAGTGCTGTGTCTATCTGTGGTGAGCCAATCCAGCGGCTCGGTGCTTATATGGTAGAAGGGCTTGTTGCTAGGAAGGAGGCATCAGGAAATAGCATATATCATGCCCTCAGGTGCCGAGAACCCGAAGGCAAAGACCTACTCTCTTACATGCACATGCTGTATGAGATTTGCCCGTACTTTAAATTCGGTTACATGGCTGCCAATGGAGCCATAGCTGAAGCTTGCAGAAATGAAGACCGCATTCACATCATAGACTTCCAGATTGCTCAGGGAGTTCAGTGGGAGACACTCCTTCAAGCTCTTGCTGCAAGGCCTGGTGGGGCACCCCATGTCCGGATCACCGGGATCGATGATCCAATTTCTCAATATGCACGTGGTTACGGCCTAGATGCAGTTGGGAAAAAATTGACGGTGATATCGGAGAAATTTGGTATCCCGGTTGAGTTTCATGGAGTGCCTGTGTTTGCTCCGGAAGTTACAAGGGACATGCTTGATGTAAGGCCAGGAGAGGCTTTGGCTGTTAACTTTCCCCTGCATCTGCATCACACAGCTGATGAGAGTGTTGATGTAAACAACCCAAGGGATGAACTTCTGAGAATGGTGAAGTCACTAGGTCCCAAGGTGGTCACATTGGTGGAACAAGAATCCAACACAAACACAACGCCATTCTACTACAGGTTCTTAGAAACATTGGACTACTACTTGGCCATGTTCGAGTCAATTGATGTCACACTGCCAAGAAATAGCAAGGAGCGGATTAACGTGGAGCAGCATTGCTTGGTGAGGGACATCGTGAACGTCATTGCTTGTGAAGGGAAGGAAAGGATAGAGCGGCACGAGCTGCTGGGAAAGTGGAAGTCAAGGTTGACAATGGCTGGATTCCGACAGTATCCATTGAGTACTTACGTGAATTCTGTGATCAGAAGCCTACTTGGGTACTATTCAGAGAATTATACGCTAGTGGAGAAGGAAGGGGCTATGTTGTTGGGGTGGAAACAGAGAAATTTGATATCAGCCTCTGCCTGGCATTGA 1761 0.4668 MDSQQLFSFSVTGSGIPFTPSYSTIPSLPTRFLGSLKFETGNSPNSPFSTQFDSDSLSNLSDGQEQQHGSGEILSGFSPSYNSSLETNYYLNSSISPVDRLQDSLHPYFARSSLAQDASSSQKIRHALLELESALMAPDDGDVVTTSNTSLSGNNRPTTSGQRYGSWSQERQESQYVQSQPSFFTSIRQSNEVAHVEKRHKVMEEAWLQGFPPSGLKELLIACAKALSEGNMKVFDELIEKARSAVSICGEPIQRLGAYMVEGLVARKEASGNSIYHALRCREPEGKDLLSYMHMLYEICPYFKFGYMAANGAIAEACRNEDRIHIIDFQIAQGVQWETLLQALAARPGGAPHVRITGIDDPISQYARGYGLDAVGKKLTVISEKFGIPVEFHGVPVFAPEVTRDMLDVRPGEALAVNFPLHLHHTADESVDVNNPRDELLRMVKSLGPKVVTLVEQESNTNTTPFYYRFLETLDYYLAMFESIDVTLPRNSKERINVEQHCLVRDIVNVIACEGKERIERHELLGKWKSRLTMAGFRQYPLSTYVNSVIRSLLGYYSENYTLVEKEGAMLLGWKQRNLISASAWH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0688 586 ProSiteProfiles GRAS family profile. 207 586 IPR005202 -
Lele10g0688 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 172 582 IPR005202 -
Lele10g0688 586 MobiDBLite consensus disorder prediction 44 75 - -
Lele10g0688 586 Pfam GRAS domain family 216 585 IPR005202 -
Lele10g0688 586 MobiDBLite consensus disorder prediction 143 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0688 Lele-ChrLele10 5198252 5200012 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0688 107 585 GRAS Transcription Factor Family AT5G48150 52.361 1.37e-173 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele10g0688 GRAS 4.3e-126 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0688 10 5198252 5200012 Lele29g0655 29 4090602 4098230 CCT
Lele10g0688 10 5198252 5200012 Lele18g0418 18 2455635 2456790 CCT
Lele10g0688 10 5198252 5200012 Lele19g0436 19 2497703 2498164 CCT
Lele10g0688 10 5198252 5200012 Lele32g0637 32 3977113 3982019 CCT
Lele10g0688 10 5198252 5200012 Lele10g0688 10 5198252 5200012 ECH
Lele10g0688 10 5198252 5200012 Lele11g0761 11 7694910 7696664 hybridization
Lele10g0688 10 5198252 5200012 Lele12g0576 12 14205601 14207361 hybridization