Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0680 ATGGGTATTCTTTCTTTCCTGATGATCATTGCTTATTTACTCCCTTCTTTCTCAGTTTCAGTTGCAGTAGATTCCATTGCTCCGAACCAGTTCATAACAGATGGAATGACCTTAATTTCTCAAGGTGGAGACTTTGAACTTGGTTTCTTTAGTCCTGGAAAATCAAAGAAACGCTACATTGGTATTTGGTACAAGAAAATCCCGATTCAGACTGTAGTTTGGGTTGCAAACAGAGTAAACCCAATCAACGGTTCATCAGGAGTTCTAACATTAACCTCTAGAGGCAAACTCGTACTACGCCAAAATGACACTGTCGTTTGGCAGGCAAACTCAGAGGAAACAACACGTAATCCATTGGTGCAGCTCTTGGATTCTGGCAATCTGGTGGTGAGAGAGGAAAACGAAGACAACCCAGAAAAGTACTTGTGGCAAAGCTTCGACTTTCCATCAGATACATTTATGCCTAGCATGAAATTTGGATATAACCTGAAGAAAGGAAAGAACTGGACTCTCACAGCTTGGAAGAATCCAGATGATCCTGCTCCAGGTGACTTCACTTGCGTTACAGATACACATAACTATCCAGATTCAGCTTTAATGAAAGGAGATAAAGTTTATAGCAGATTTGGACCATGGAATGGTCTTCACACAAGTGGCTCACCTGACGTGAAACCAAACCCTGTTTATTACTTCAAATTCGTCTACAACAAAGAGGAGATCTCCTACACATATTATCTGACAAACAGTTCTGTATACTCAAGGATAGTGATGAATCAAACTGATCTCGCTCGGTATCGATACGTGTGGGTGGAAGCTAATCGAAACTGGATGGTTTATAAATCAAAGCCAGTAGATTACTGTGATCATTATGGTTTATGTGGAGCTAATGGGAACTGTATCATCACTGAATCACCAGTTTGTCAGTGCTTAAAAGGGTTCAGTCCTGAGTCACCACAAGCTTGGAATTCTATGGATTGGTCTGCTGGGTGTGTTCGAAATAAAAATCTGAATTGTTCTGAGGATGGGTTTATCAAATTGCAAGGATTGAAAGTGCCAGATACAACACATTCTTGGCTTGATGAGACAATGGGGTTAGAGGAATGTAGACAGAGATGCTTGAATAATTGTTCTTGTATGGCATTCACAAATTCAGATGTAAGAGGACGAGGAAGTGGTTGTGCCATGTGGTTTGGCGATCTTGTTGATATTAGACAGTTTGCTTCTGGAGGACAGGATCTCTATGTACGAATGGCTGCTTCAGAATTAGAAGTGGGATCTCGACGCAGAAAGAAATTGATAATAATAATAGTTGCTACCACCATTGCTGCGATTTCAGGGATGCTTCTAGTTGGATGTTATTTTATTTGCAAGGTCTGCAGAAAGATGACTGATAAAGCAACAATTAAAGAAGAAGATCAACACAGTGAAGCATCTGAAGATAATGTAGACCTCACTTTGTTCGACCTGCCTACGATAACTAATGCCACCGATAACTTTTCGCTGCAGAACAAAATCGGACAAGGTGGATTTGGAACTGTGTACAAGGGAAAATTAGTGAATGGGAAATTAATTGCAGTGAAGAGACTCTCTAGGAGCTCAGGACAGGGATTAATTGAATTCAAGAATGAAGTGAGACTAATTGCAAAACTTCAGCACCGAAATCTTGTAAAACTTCTCGGTTGCTGCATTCAAGGACAAGAGAAGATGCTTGTTTATGAGTACATGCCAAATGGAAGCTTGAACTCCTTCATTTTTGATGAAAATAGAGGTAAGTTGCTGGATTGGCCTAAACGTTTTGATATAATTTGTGGCATTGCTCGAGGTCTCATGTATCTTCATCAAGATTCTAGACTGAGAATCATTCATAGAGATCTAAAGACAAGTAATATTTTGCTTGATGAGAAGTTGAATCCAAAAATATCAGATTTTGGCATGGCTAAAACTTTTGGTGGAGAGCAAACAGAAGGAAATACAAATAGAGTAGTGGGTACCTATGGTTATATGGCACCAGAATATGCAGCAGATGGATTATTCTCAATAAAATCCGATGTGTTTAGCTTTGGTATTTTGGTAATGGAAATTATATATGGGAAGAAAAATAGAGGATTCTACAACGTAGATCATTCTCATAACCTTATATGCCATGCATGGTTGCTGTGGAAAGAGGGGAGGGCTTTGGAACTGATAGACAGGAACATAGAGGAGACATATATTGTATCAGAAATAATGAGATGCATCCACATAAGTCTTCTGTGTGTGCAACAACATCCTGAAGACAGACCAAACATGTCTTTGGTTGTTTTGATGTTGGGGAGTGACAATGAATTGAATGAGCCTAAACAACCTGGTTTCTTTACAGGCAAGGCTACACATGAAGCGATTTCATCATCAAGTTATCACATGCAATCTGGTTCAACTAATGAAATAACCTTCACCTTACTAGAAGCTCGATGA 2454 0.3949 MGILSFLMIIAYLLPSFSVSVAVDSIAPNQFITDGMTLISQGGDFELGFFSPGKSKKRYIGIWYKKIPIQTVVWVANRVNPINGSSGVLTLTSRGKLVLRQNDTVVWQANSEETTRNPLVQLLDSGNLVVREENEDNPEKYLWQSFDFPSDTFMPSMKFGYNLKKGKNWTLTAWKNPDDPAPGDFTCVTDTHNYPDSALMKGDKVYSRFGPWNGLHTSGSPDVKPNPVYYFKFVYNKEEISYTYYLTNSSVYSRIVMNQTDLARYRYVWVEANRNWMVYKSKPVDYCDHYGLCGANGNCIITESPVCQCLKGFSPESPQAWNSMDWSAGCVRNKNLNCSEDGFIKLQGLKVPDTTHSWLDETMGLEECRQRCLNNCSCMAFTNSDVRGRGSGCAMWFGDLVDIRQFASGGQDLYVRMAASELEVGSRRRKKLIIIIVATTIAAISGMLLVGCYFICKVCRKMTDKATIKEEDQHSEASEDNVDLTLFDLPTITNATDNFSLQNKIGQGGFGTVYKGKLVNGKLIAVKRLSRSSGQGLIEFKNEVRLIAKLQHRNLVKLLGCCIQGQEKMLVYEYMPNGSLNSFIFDENRGKLLDWPKRFDIICGIARGLMYLHQDSRLRIIHRDLKTSNILLDEKLNPKISDFGMAKTFGGEQTEGNTNRVVGTYGYMAPEYAADGLFSIKSDVFSFGILVMEIIYGKKNRGFYNVDHSHNLICHAWLLWKEGRALELIDRNIEETYIVSEIMRCIHISLLCVQQHPEDRPNMSLVVLMLGSDNELNEPKQPGFFTGKATHEAISSSSYHMQSGSTNEITFTLLEAR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0680 817 CDD B_lectin 29 149 IPR001480 -
Lele10g0680 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 463 574 - -
Lele10g0680 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Lele10g0680 817 ProSiteProfiles Bulb-type lectin domain profile. 23 143 IPR001480 -
Lele10g0680 817 Gene3D - 18 146 IPR036426 -
Lele10g0680 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 620 632 IPR008271 GO:0004672|GO:0006468
Lele10g0680 817 SMART serkin_6 499 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0680 817 SMART ntp_6 338 417 IPR003609 -
Lele10g0680 817 Pfam S-locus glycoprotein domain 208 316 IPR000858 GO:0048544
Lele10g0680 817 SUPERFAMILY Protein kinase-like (PK-like) 483 788 IPR011009 -
Lele10g0680 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 180 IPR036426 -
Lele10g0680 817 ProSiteProfiles PAN/Apple domain profile. 338 418 IPR003609 -
Lele10g0680 817 Gene3D Phosphorylase Kinase; domain 1 457 574 - -
Lele10g0680 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 761 - -
Lele10g0680 817 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Lele10g0680 817 CDD STKc_IRAK 505 770 - -
Lele10g0680 817 CDD PAN_AP_plant 335 418 - -
Lele10g0680 817 ProSiteProfiles Protein kinase domain profile. 499 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0680 817 Pfam PAN-like domain 338 403 IPR003609 -
Lele10g0680 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 575 778 - -
Lele10g0680 817 Gene3D Transferase(Phosphotransferase) domain 1 575 782 - -
Lele10g0680 817 SMART blect_4 29 149 IPR001480 -
Lele10g0680 817 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Lele10g0680 817 Pfam Protein tyrosine and serine/threonine kinase 500 767 IPR001245 GO:0004672|GO:0006468
Lele10g0680 817 Pfam Domain of unknown function (DUF3403) 775 817 IPR021820 GO:0004674
Lele10g0680 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 146 - -
Lele10g0680 817 Pfam D-mannose binding lectin 71 175 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0680 Lele-ChrLele10 5097545 5101195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0680 432 784 Receptor kinase-like Gene Family AT4G23230 55.085 1.55e-126 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele10g0680 PK_Tyr_Ser-Thr 1.2e-49 CL0016