Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0673 ATGGCGGAAGATCAATTTCAAGCCACTGGAAACTGGTGGGACTCAGCCAGAAATTCCACCACCAGGTTCGAAACTGAAGCTTCTCAATCCTCCTCCTCCATCCCCAACTTCGCTTGGCAACATACAGATATGTCGTCGCCGTCGCATGACCTCAAGCCAAGGTCGTCTTCCATGGCGGCTTCACCTTCTTCCTCCGACCCCAACCTGCACATGATGGGTTTAGGCCTCTCTTCCCAACAACTTTTCGACTGGAATAATCAACCCTCCTTTCTTCGAGGTGCAGAGAAAGGTGGGGATCAGAGCAGTTTCTTGAACTCATCATCAAGCACGAATTTTCAGCAAGAAAGTGCGATGATGGGGTTGTCTCATCATCATCATCATCAAGTTCAATGGAGGGACAAGTTGTTTTCTGCAGATTCGTCTTCTTCAACGAACGAGTTCAAACAAGTGAACCACCGGCCGCCGGCGGGTTTCTCTTTGGATCAAACTCAGTTCAGTCCTCAATATAGTTCTGGGGAAAGCACTGTAACAACCCAACAAGGCTTAGCTTCTAGTACTACTAACTTTCAAATGGATTTGTATGGAAACTCGTCCATATTACAAGGATTATTAGGACCTGATCATAATAACAATAATCAAGTTCAGTATGATCATCATCATCATCAGAATCAGAATCGCCAGATGAACTTCCCATACCAACAATCTTCAAGCTACGGATTGAACAGTAACGATCATTTAATTCCTTCATGGTCTAAAGTTCCTCAATTTCTCAGAGCTTCACCTCCAAAACAACAACATGCCCATAATAATAACAATCAGTTGCATTTCACAAACAACGCTCCTTTCTGGAACGCAGCTTCTGAGGCCTCCCATATTAAAGATGTTAGATCTGGTGCTGGCTTCTTTCCCTCTTTGCAACCTCCATTTCCATCTCCAACCTTCGATGTTCAATCCAAGAATATGTGTGAAGTTAGGGAGTCGAGTAGCGTGGTGAAGAAAAGTGGTGGGAGCGAGGCGGAGGCGGCGGCAACCAAAAGGCCTCGGAATGAAACTCCATCTCCTTTGCCTGCGTTTAAGGTAAGAAAAGAGAAGATGGGGGACAGAATCACTGCACTTCAACAATTGGTTTCGCCTTTCGGAAAGACGGATACAGCCTCGGTGCTGTCTGAAGCTATTGAATACATCAAATTCCTCCATGAACAAGTGACAGTTTTAAGTACACCGTATATGAAAAGTGGAGCTCCCATACAGCATCAACAGAGTCCTGGTAAATCTAAAGAAGGTGATGGTGGTGGTGGAAAGCCAGATCTGAGAAGCAGAGGGCTATGTCTGGTGCCTATGTCGAGTACATTTCCGGTGACTCAAGAAACCACCGTTGATTTTTGGACGCCAACATTCGGAGGAACATTCAGATAA 1416 0.4534 MAEDQFQATGNWWDSARNSTTRFETEASQSSSSIPNFAWQHTDMSSPSHDLKPRSSSMAASPSSSDPNLHMMGLGLSSQQLFDWNNQPSFLRGAEKGGDQSSFLNSSSSTNFQQESAMMGLSHHHHHQVQWRDKLFSADSSSSTNEFKQVNHRPPAGFSLDQTQFSPQYSSGESTVTTQQGLASSTTNFQMDLYGNSSILQGLLGPDHNNNNQVQYDHHHHQNQNRQMNFPYQQSSSYGLNSNDHLIPSWSKVPQFLRASPPKQQHAHNNNNQLHFTNNAPFWNAASEASHIKDVRSGAGFFPSLQPPFPSPTFDVQSKNMCEVRESSSVVKKSGGSEAEAAATKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQSPGKSKEGDGGGGKPDLRSRGLCLVPMSSTFPVTQETTVDFWTPTFGGTFR 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0673 471 MobiDBLite consensus disorder prediction 1 72 - -
Lele10g0673 471 MobiDBLite consensus disorder prediction 413 441 - -
Lele10g0673 471 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 359 416 IPR036638 GO:0046983
Lele10g0673 471 MobiDBLite consensus disorder prediction 88 108 - -
Lele10g0673 471 CDD bHLH_AtbHLH_like 355 406 IPR045239 -
Lele10g0673 471 SMART finulus 360 404 IPR011598 GO:0046983
Lele10g0673 471 FunFam Transcription factor bHLH123 family 359 421 - -
Lele10g0673 471 MobiDBLite consensus disorder prediction 327 357 - -
Lele10g0673 471 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 349 398 IPR011598 GO:0046983
Lele10g0673 471 MobiDBLite consensus disorder prediction 140 161 - -
Lele10g0673 471 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 121 452 - -
Lele10g0673 471 Gene3D - 359 419 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0673 Lele-ChrLele10 5022012 5024131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0673 274 471 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 65.174 1.41e-73 235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0673 10 5022012 5024131 Lele10g0673 10 5022012 5024131 ECH
Lele10g0673 10 5022012 5024131 Lele11g0740 11 6998958 7001037 hybridization
Lele10g0673 10 5022012 5024131 Lele12g0595 12 14382745 14386217 hybridization