Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0667 ATGGTTGGTGGTACTTTGATTAATGATAAAAAAATATCTCCAATGTGTTATGGCCCAGCTGAGAATGCTCATGTTGCTAAATATAGGATGGTGTTGGAACGATCTCCATTCTCATTGGATCGGAAAAAGTGGTCTAATGTGGAGAGGGAGAATCTTGCCAAGGGAATAAAGCAACAATTTCAAGAACTGGTGCTTCAAATGTCAATAAATCAAGACAAGTGGTTAAATTGTGAAGAACCCCTGATCAATCATATCCCATGGACCTGTGAGGAGGACAAGTTACTGTTGCACATAATCCAAGAAATTGGCAATAGGAACTGGTTTAAAATTGCCACATCACTAAACACAAATAGGTCCCCATTTCAATGCTTGGCACGATACCAGAGGGGTTTAAATCCTTTCATGCTAAATAGCGAATGGACTAAGGAAGAAGATGCTCTACTTCGTTCTGCTGTTGCAATTTTTGATGTGAGCAATTGGCAGTCCGTAGCTTCTGTGTTAGAGCGGAGGAACTGA 516 0.405 MVGGTLINDKKISPMCYGPAENAHVAKYRMVLERSPFSLDRKKWSNVERENLAKGIKQQFQELVLQMSINQDKWLNCEEPLINHIPWTCEEDKLLLHIIQEIGNRNWFKIATSLNTNRSPFQCLARYQRGLNPFMLNSEWTKEEDALLRSAVAIFDVSNWQSVASVLERRN 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0667 171 PANTHER SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 4 11 69 - -
Lele10g0667 171 ProSiteProfiles Myb-like domain profile. 132 171 IPR001005 -
Lele10g0667 171 ProSiteProfiles Myb-like domain profile. 79 131 IPR001005 -
Lele10g0667 171 SUPERFAMILY Homeodomain-like 72 133 IPR009057 -
Lele10g0667 171 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 79 135 IPR017930 -
Lele10g0667 171 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 140 171 IPR017930 -
Lele10g0667 171 SUPERFAMILY Homeodomain-like 116 170 IPR009057 -
Lele10g0667 171 Pfam Myb-like DNA-binding domain 87 148 - -
Lele10g0667 171 Gene3D - 133 171 - -
Lele10g0667 171 Gene3D - 82 129 - -
Lele10g0667 171 SMART sant 136 170 IPR001005 -
Lele10g0667 171 SMART sant 83 133 IPR001005 -
Lele10g0667 171 CDD SANT 139 170 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0667 Lele-ChrLele10 4992749 4994124 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0667 8 170 MYB-Related Transcription Factor Family AT3G18100 42.991 3.46e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele10g0667 Myb_DNA-bind_6 2.4e-15 CL0123