Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0662 ATGTATACTCTGCATTCAATTGATCATGCCTTCCTTGCTCTCAAACGCAAGATGATACTAAACTTGATTCTCAATTCGTTCCTTAGTCTGATGTGTCTTTCCTTACAGTCCACGGATGCAATTACGTACAAAGAAACGTTGGGGATGGGCCAATTACTTGGAACCTCAGATACATTGGTGTCTGCTAACGGCTCCTTCGAACTGGGGTTTTTCACTCGAGAGAATTCCACCAAGTATTACCTAGGTATGTGGTTTAAGAAAGTTTCTAAAGACAACATCGTTTGGGTTGCAAATAGAAAGCTCGCAGCCAGCGATTCCAATGCCGTTCTCACTGTTACTGACGATGGAAATCTCGTAGTTAAGAATGATGGAATGGTATACTTCGTCAGCAATATTTCCGACATCACCAGTACCCATGCTATGCTCTTGGATTCTGGTAATCTCCTCCTCATGAACAGCTCAAACTTGAACATTCTTTGGCAAAGTTTCGACAATCCTACAAATACCCTCTTGCCTGGAATGAAGGTAGGATTTGACGCAGGAATCAGCTTGTCGTTGACATCGTGGACAAGTGTAGAAGACCCAAGTCCTGGAAAATTTTCTCTTGAAGTTGACGGGGCCATGGAGAATGCGAGGCTAATCATCATGAGGGAATCCGAGATATATTGGATTGGCGATGAGCTATCAAATTTCACGTTTCAAAGTATTGATAATCGAGACCCTGCTATATGGGACACGGGCTATTCCTATTTAACTTGGCAAGGGGACTATACTTCTCAATTGGTTCTTGAAGTTTCTGGGGAGCTTAACCAGAAATTTTGGTCACAAGATTCCATGCAATGGGTTTCTTTGCAGTCATCCAAGTGCGGTAGAAACGCAATCTGTGGAGATTTTGGCATCTGTAACCCACAAGGTACTGATCTCTGTCAGTGTCTCCGAGGATTTATGCCGTACGATGAAGATTCTTGGAAAAAGGGGGACACATCCGCAGGTTGTGTGAGAAAAACAGAGTTGCTCTGCGGAAATGGGAGCAGTGATGGATTGGGTGACGGGTTTTTACAAGTATATAGAGTGGATTTTTCTTCTGGTAGTCCGATTTCCTTCATAACTGACAACGCAACCACGTGTCAAAGAGATTGCTCAATCAATTGTTCTTGCGTCGCTTATGCTTACGATGTTACGGGTCATTGCTTGTTCTGGCTTGACCGAGTGTTGAATCTGAAGAACATCTCGGTTGACGTTAGAGATGATAATTCTAGACCAAGTTTCTTTCTCAAACTGGCTCGCACTGACTTGATTAACAATGTGCCGAGTAATCCAGATCATAATTCGAATCAAAGCCGGAAGACGTTACTAACAGTTGTAATAGTTATCATATTTGTTGCATTGCTTCTATCTGCTCTATTTGCTTACTGCTGCTGGAGGAGAAAGCTTAGGGGACAAGGGGAGGATCTGCTATTGTTTGATCCAAGCATGAGCATGAAAGTTAAGATTTCAGAGATCAGTGATGTCGATAAGGTTGGAAAAGTGAACAAGAGGGATGTCAAATTGCCAATGTTTAGTTTTGCAAGTGTTTCTGCAGCAACTAATAACTTCTCATCTGAAAATAAGCTTGGTGAGGGTGGCTTTGGACCCGTTTATAAGGGTAAGCTGTTGAATGGGGATGAGGTTGCTGTGAAAAGGCTATCAGCAAGATCTGGTCAAGGATGGGAGGAGTTGAAAAATGAGGCATTGCTCATTGCAAAACTCCAACACAACAACCTTGTCAGGCTTTTGGGTTGCTGCGTTGAACGTGATGAAAAGATGCTTATTTATGAATTCATGCCAAACAAAAGCTTGGATTTTTTCCTTTTTGATGCAACAAAACGCGGGATTCTAGACTGGAAAACCCGAGTCCAGATTATTGATGGAATTGCCCAAGGTCTTCTTTATCTACACCAATATTCTAGGTTCCGAATAATTCACAGAGATCTAAAAGTTAGCAATATTTTGTTAGACATCGACATGAATCCCAAAATATCAGATTTCGGAATGGCAAGACTATTTGGTGAAAATGAATTACAGGCAAATACAAATCGGATAGTTGGCACTTACGGTTATATGTCTCCTGAATATGCATTAGAAGGTATTTTCTCAATAAAATCAGATGTGTTCAGCTTTGGAGTCCTTTTGTTGGAGATAATAAGTGGCAAAAAGAATACTGGTCTATATAATACAAACTCCCTCAATCTTCTTGGATATGCATGGGACCTTTGGAAAAGTGGGAGAGGAACAGAGCTGATGGATTCAGAGTTAGAAGACGCATCCATAAATAAAATTGTGGTGAGGAGATATGTGAACATAGCACTGCTTTGTGTACAAGAAAGTGCAGAAGACAGACCAGCCATGTCTGATGTTGTTTCAATGCTTGGGAATGAGAACATGGTACTGCCTTTTCCTAAGCCCATAGCTTTCCTTAATGTAAGAGGCATCATAAGGACTTCAAGATCAGACGGAAGCTCATCAGCAGAAAATGTGTCTATCAATAACATGACTGCTTCTGTTATGGAAGCAAGATGA 2559 0.4142 MYTLHSIDHAFLALKRKMILNLILNSFLSLMCLSLQSTDAITYKETLGMGQLLGTSDTLVSANGSFELGFFTRENSTKYYLGMWFKKVSKDNIVWVANRKLAASDSNAVLTVTDDGNLVVKNDGMVYFVSNISDITSTHAMLLDSGNLLLMNSSNLNILWQSFDNPTNTLLPGMKVGFDAGISLSLTSWTSVEDPSPGKFSLEVDGAMENARLIIMRESEIYWIGDELSNFTFQSIDNRDPAIWDTGYSYLTWQGDYTSQLVLEVSGELNQKFWSQDSMQWVSLQSSKCGRNAICGDFGICNPQGTDLCQCLRGFMPYDEDSWKKGDTSAGCVRKTELLCGNGSSDGLGDGFLQVYRVDFSSGSPISFITDNATTCQRDCSINCSCVAYAYDVTGHCLFWLDRVLNLKNISVDVRDDNSRPSFFLKLARTDLINNVPSNPDHNSNQSRKTLLTVVIVIIFVALLLSALFAYCCWRRKLRGQGEDLLLFDPSMSMKVKISEISDVDKVGKVNKRDVKLPMFSFASVSAATNNFSSENKLGEGGFGPVYKGKLLNGDEVAVKRLSARSGQGWEELKNEALLIAKLQHNNLVRLLGCCVERDEKMLIYEFMPNKSLDFFLFDATKRGILDWKTRVQIIDGIAQGLLYLHQYSRFRIIHRDLKVSNILLDIDMNPKISDFGMARLFGENELQANTNRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIISGKKNTGLYNTNSLNLLGYAWDLWKSGRGTELMDSELEDASINKIVVRRYVNIALLCVQESAEDRPAMSDVVSMLGNENMVLPFPKPIAFLNVRGIIRTSRSDGSSSAENVSINNMTASVMEAR 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0662 852 SMART blect_4 50 166 IPR001480 -
Lele10g0662 852 Gene3D - 39 163 IPR036426 -
Lele10g0662 852 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 608 811 - -
Lele10g0662 852 Pfam D-mannose binding lectin 93 189 IPR001480 -
Lele10g0662 852 PIRSF SRK 15 852 IPR024171 GO:0004674
Lele10g0662 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 653 665 IPR008271 GO:0004672|GO:0006468
Lele10g0662 852 Gene3D Transferase(Phosphotransferase) domain 1 608 809 - -
Lele10g0662 852 Pfam PAN-like domain 349 406 IPR003609 -
Lele10g0662 852 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 127 828 - -
Lele10g0662 852 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 39 163 - -
Lele10g0662 852 Pfam S-locus glycoprotein domain 246 317 IPR000858 GO:0048544
Lele10g0662 852 ProSiteProfiles PAN/Apple domain profile. 340 428 IPR003609 -
Lele10g0662 852 SUPERFAMILY Protein kinase-like (PK-like) 515 803 IPR011009 -
Lele10g0662 852 CDD STKc_IRAK 538 803 - -
Lele10g0662 852 ProSiteProfiles Bulb-type lectin domain profile. 44 163 IPR001480 -
Lele10g0662 852 Pfam Protein tyrosine and serine/threonine kinase 535 803 IPR001245 GO:0004672|GO:0006468
Lele10g0662 852 CDD B_lectin 51 166 IPR001480 -
Lele10g0662 852 ProSiteProfiles Protein kinase domain profile. 532 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0662 852 SUPERFAMILY alpha-D-mannose-specific plant lectins 93 194 IPR036426 -
Lele10g0662 852 Gene3D Phosphorylase Kinase; domain 1 507 607 - -
Lele10g0662 852 SMART serkin_6 532 796 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele10g0662 852 FunFam Uncharacterized protein 507 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0662 Lele-ChrLele10 4952418 4955568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0662 435 848 Receptor kinase-like Gene Family AT4G05200 47.981 5.24e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele10g0662 PK_Tyr_Ser-Thr 2.4e-46 CL0016