Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0657 ATGATGAAGCCTTCTTCTTCTAATGATCAGAAGAATGGATTGAAGAAAGGCCCTTGGACTCCCGAAGAAGATCAGAAGCTTATGGATTATATTCATAAACATGGACATGGGAAATGGCGTACTCTTCCCAAGAATGCTGGACTTAAGAGATGTGGAAAGAGTTGCCGGCTTCGGTGGACGAACTACTTAAGGCCAGATATAAAGAGAGGCAGATTCTCATTCGAGGAAGAAGAAACCATCATCCAGTTACACAGTGTCTTGGGAAACAAGTGGTCCACGATTGCTGCGAGCTTGCCGGGAAGAACAGATAATGAGATAAAGAATTACTGGAATACCCATATCAAGAAGAGGCTGTTGAAGATGGGGATTGATCCGGTGACTCACACCCCATGCTTGGATATTCAACAACTCTCCTCCATTCTCAACTCTTCTCTCTGCAACCATCCTCCTGATCCTCACTTTGGAATCCCAAATAATAATATATTAAACCCAAACCTCTTAAGCTTCCTCACAGCTTTCTTATCATCATCATCATATCAGAACCCATCAGATCACGCTCCAAATCAGAATTACCAGTTGAATAGCTCTATTCAAACCTTCCCTCTTCATCAAGAAAACCAGTCCTGTGCTGCTTCACAGCCTTTACCTCTGGAATCTGATCAACTCATGAAAGCAAAACTAGGTCAAATGATGTTCTCTCCAGCAGATACCACTAATTTTAGCTACCAAAGTAGCCTACCAAATTTGGGGAAGTACGATGGAGGTCATAATAATTACTCTACCAGTCTTTTGGAGAATCAGATTGCACGAAACAACGGAGGAGATCCAAATTTTACTTTAGGGTCATTGATATCATCGTACTCGACGACCCCTTCATGTTCTACTAGTCCGAGCACTTTGAATTCGTCAGCGTCATCCACAGCAACATTCATCAAAGGTGCCACTGAAGAGGAAAGGGACACTTACTGCAGCAACATGTTGATGTATAACATCTCAAACGGCTTAAATATTGATTCCTCTTGTCTTTTGTGA 1032 0.4215 MMKPSSSNDQKNGLKKGPWTPEEDQKLMDYIHKHGHGKWRTLPKNAGLKRCGKSCRLRWTNYLRPDIKRGRFSFEEEETIIQLHSVLGNKWSTIAASLPGRTDNEIKNYWNTHIKKRLLKMGIDPVTHTPCLDIQQLSSILNSSLCNHPPDPHFGIPNNNILNPNLLSFLTAFLSSSSYQNPSDHAPNQNYQLNSSIQTFPLHQENQSCAASQPLPLESDQLMKAKLGQMMFSPADTTNFSYQSSLPNLGKYDGGHNNYSTSLLENQIARNNGGDPNFTLGSLISSYSTTPSCSTSPSTLNSSASSTATFIKGATEEERDTYCSNMLMYNISNGLNIDSSCLL 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0657 343 Gene3D - 71 118 - -
Lele10g0657 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 11 67 IPR017930 -
Lele10g0657 343 CDD SANT 18 63 IPR001005 -
Lele10g0657 343 CDD SANT 71 114 IPR001005 -
Lele10g0657 343 Pfam Myb-like DNA-binding domain 69 113 IPR001005 -
Lele10g0657 343 Pfam Myb-like DNA-binding domain 16 63 IPR001005 -
Lele10g0657 343 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 244 - -
Lele10g0657 343 FunFam MYB-related transcription factor 15 68 - -
Lele10g0657 343 ProSiteProfiles Myb-like domain profile. 11 63 IPR001005 -
Lele10g0657 343 SMART sant 68 116 IPR001005 -
Lele10g0657 343 SMART sant 15 65 IPR001005 -
Lele10g0657 343 Gene3D - 13 69 - -
Lele10g0657 343 SUPERFAMILY Homeodomain-like 13 110 IPR009057 -
Lele10g0657 343 MobiDBLite consensus disorder prediction 1 21 - -
Lele10g0657 343 ProSiteProfiles Myb-like domain profile. 64 114 IPR001005 -
Lele10g0657 343 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 68 118 IPR017930 -
Lele10g0657 343 FunFam Transcription factor MYB39 71 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0657 Lele-ChrLele10 4893200 4894484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0657 10 338 MYB Transcription Factor Family AT4G21440 48.451 2.77e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele10g0657 Myb_DNA-binding 1.9e-16 CL0123