Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0651 ATGCTTGAATCAATCCGGCGGAGGGGAGAAGAAGAGAAGCCGAAGGACTTGCCGCCAGCATTGCCGTCTCGTCCGACGTCAAGGGCTCGGCTTCCTTCAGCGAGACGGTCGTTGCCGAGTAAATTTAGGTTTGAAGGTGATCAGGATGCAACAACAAGCTCCCAGGATAATTCCAATGCAGAGGCAAAAGAAGAGATCAAGAAGAAAGAAGGGGATGTGGGACATAAGAGAAAAGGAAGTTTTGCGAGCAAGAAGATGAAGCAAGACACGGAATCGCCTTATATCGTGACATCGGAAGAGAATATAAGCCAACCGTCGTCAGAAGGCCCTGTTTCAGCATCTACTGCTTCCATAGCAACATCGGGGAAGATTCACGAATTGGATGGTGATGATAATGTTGCTTATTACATAAAAAAGATTATGAAAGTGGCAAGATCAGAGCTCTTACCAGCTAATCCAGATATTCTAGAGGGTGTGGATGATCTTATACAGCTTAGTTACTTACATGAGCCCTCAGTTCTTCATAATCTCCGGTTTAGATATTATCAGGACATGATATACAATAAAGCAGGACCGGTTTTAATTGCCCTCAATCCCTTCAAAGATATCGAGATGTATGGAAATGATTATATCTCGGCTTTTAGGCAGAAGACTACGGATAGTCCTCACGTGTATGCCATAGCAGATTTGGCTTTTAATGAGATGATGAGAGATGAAGTAAACCAATCCATTATTATAAGTGGCGAGAGTGGAGCCGGGAAGACAGAGACAGCAAAGTTTGCCATGAAATACTTTGCAGCTCTAAGTGGCAGCAGTTGTGGGATAGAAAAGGAAGTCCTTCAGACAAATTGTATACTAGAAGCTTTTGGGAATGCAAAAACATCTAGGAATGACAACTCTAGCAGATTTGGTAAGTTGATTGAGATTCATTTCAGCACATTGGGGAGGATATGTGGAGCCAAAATTCAAACCTTTGTTCAACTGGCCAGCGGTGAGAGGTCGTATCATATCTTTTATCAACTTTGTGCTGGTTCTTCACCTGATCTTAAAGAGAGACTGAAGCTTAAAGCTTCTCGTGAATATAAATATCTCAACCAAAGTGACTGCATGGCAATTCATGGTGTTGATGATGCTAAAAAGTTTCATAAGCTAATGAAAGCACTGGATGATGTTCGAATTAGCAAGGAGGATCAAGACCTAGTCTTCAAGGTGGTTGCAGCAATACTGTGGCTGGGAAACATATCATTCCGAGTAACTGACAATGAAAATCACATTGAGGTTGTAGACGATGAAGCTGTTACCAATGCTGCCCTGCTAATGAGTTGCAGATCCCAGGATTTAATGGTAACTTTATCTACTCGGAAAATCAAAGCTGGAAAAGATACTATTGCCAAAAAGTTGACATTGTGCCAGGCAACTGACACAAGAGATGGATTGGCAAAGTCCATATATGCAAGCTTGTTTGACTGGCTTGTAGAACAAATTAACAAGTCACTTGAAGTGGGTAAACGTTGCACTGGGAGATCCATAAGTATCCTTGATATCTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTCTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAAGACTATGAATTGGATGGTGTTGATTGGACAAAAGTAGATTTTGAGGACAATCAAGAGTGCTTGGATCTTTATGAGAAGAAACCTCTGGGGCTGATCTCTCTGTTGGATGAGGAATCAAATTTCCCCAAGGCTACTGATCTAACATTTGCCAACAAACTTAGACAGCACCTGAAAGCTAATCCTTGTTTCAAAGGGGAAAGAGGCGGAGCTTTTCGTGTTCGCCATTATGCGGGGGAGGTTTCGTATGACACAAATGGATTTCTAGAAAAGAACAGAGATCCACTGCCTCCAGATTCCATTCAACTCCTGTCATCATGTAATTGTCAACTGCTGAAGTTGTTCTCCAAAATGAATGATCAATCTAAGCAGTCAAATTCCTCCCACGTCGGCGCATTGGGTTCAAAAAAGCAGAGTGTTGGAACAAAGTTCAAGGGCCAATTATTCAAGCTGATGAATCAGTTGGAGGGAACCACACCTCACTTTATTCGCTGCATAAAGCCCAATGCTAAGCACCTTGCTGGAACGTATGATGAGGACCTTGTCTTACAACAGCTCAGGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGGCTGGATATCCCACTCGAATGATGCATCAAGAGTTTGCCAGAAGGTATGGGTTTTTGCTTTCTGAGGACAGCGTATCTCAGGATCCATTAAGCATCTCAGTTTCTGTTTTACAACAGTTTAATATCCCTCCTGAAATGTACCAAGTCGGCTACACAAAACTGTATCTCCGAACAGGGCAGATTGTTGTCCTGGAGGATAGGAGGAGACAGATTATAGTGGGAATACTCGGGGTTCAAAAATGGTTACGTGGTCATCAAGCTCGCCGAAACTTTAAAGTCCTCAAGAATGGAGCAATAGCCTTACAATCAATTGTTCGTGGAGAGATTGAAAGAAAGGCATATCAGGCAAAGAAGTCTGCTGTATCTGTTGCTGCTGAAAAGCTTCAGCAGGCCCAGGCAATCACACGTTTACAATCTGTGATCCGGGGATGGTTGGTTCGAAGGCGTGCTGGTAGTCTCATTCATAAGTTGAAGAAAGATGTTAAAAACGCTAAACATAAGCATAAGTCACGTTCTAAGATGTCAGAAATGAAGGATTTGTCCAAAGAGCAGGTTCATAATCTGCCATCAACTTTGGTAGAACTCCAGAACCGGGTTGCCAAAACTGAAGCAACTGTGAAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAACTAAAACAATTTGAGACTAGGTGGATTGAGTATGAGATGAAGATGAAATCAATGGAACAGATGTGGCAAAAACAGATGACATCTTTGCAAAAGAGTCTTGCTGTTGCTAAGATGAGCCTTGCAGCTGAGAATTCCACTGATCAACCTAGAAGATATGATGCTATGTCACCTGGCTTCTATGACTCAGAAGATGCTTCTTCCATGGAATCTAGAACACCCGCGGGCAGCACGCCTATCAAGTTTCCTAGCACTCCTTATGAGAATGGAGCAAGGAGAGAAGCTAAAGATACTTTCAATGCAGTCAGCAATCTCATGAAAGAATTCGAGCAGCGGAAACAGACTTTTGATGATGATGCCAAAGCTCTACTTGCAATCAAATCAGGGCACCCTGCTCACACGAATCCCAACGAAGAAATCAGGCAGCTTAAACGCCGATTTCAAGGATGGAAGAAAGAGTACAAGGCACGATTACGGGAAACAAAAGCTAGGCTTTCTAAGATAAGGAGTCCAGAAGCCGAAGTTAGTTGTCAAAAGTGGTGGGGGAAGATAAGCTCAAGAGGACAATAG 3474 0.4257 MLESIRRRGEEEKPKDLPPALPSRPTSRARLPSARRSLPSKFRFEGDQDATTSSQDNSNAEAKEEIKKKEGDVGHKRKGSFASKKMKQDTESPYIVTSEENISQPSSEGPVSASTASIATSGKIHELDGDDNVAYYIKKIMKVARSELLPANPDILEGVDDLIQLSYLHEPSVLHNLRFRYYQDMIYNKAGPVLIALNPFKDIEMYGNDYISAFRQKTTDSPHVYAIADLAFNEMMRDEVNQSIIISGESGAGKTETAKFAMKYFAALSGSSCGIEKEVLQTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGRICGAKIQTFVQLASGERSYHIFYQLCAGSSPDLKERLKLKASREYKYLNQSDCMAIHGVDDAKKFHKLMKALDDVRISKEDQDLVFKVVAAILWLGNISFRVTDNENHIEVVDDEAVTNAALLMSCRSQDLMVTLSTRKIKAGKDTIAKKLTLCQATDTRDGLAKSIYASLFDWLVEQINKSLEVGKRCTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNQECLDLYEKKPLGLISLLDEESNFPKATDLTFANKLRQHLKANPCFKGERGGAFRVRHYAGEVSYDTNGFLEKNRDPLPPDSIQLLSSCNCQLLKLFSKMNDQSKQSNSSHVGALGSKKQSVGTKFKGQLFKLMNQLEGTTPHFIRCIKPNAKHLAGTYDEDLVLQQLRCCGVLEVVRISRAGYPTRMMHQEFARRYGFLLSEDSVSQDPLSISVSVLQQFNIPPEMYQVGYTKLYLRTGQIVVLEDRRRQIIVGILGVQKWLRGHQARRNFKVLKNGAIALQSIVRGEIERKAYQAKKSAVSVAAEKLQQAQAITRLQSVIRGWLVRRRAGSLIHKLKKDVKNAKHKHKSRSKMSEMKDLSKEQVHNLPSTLVELQNRVAKTEATVKQKEEENTALREQLKQFETRWIEYEMKMKSMEQMWQKQMTSLQKSLAVAKMSLAAENSTDQPRRYDAMSPGFYDSEDASSMESRTPAGSTPIKFPSTPYENGARREAKDTFNAVSNLMKEFEQRKQTFDDDAKALLAIKSGHPAHTNPNEEIRQLKRRFQGWKKEYKARLRETKARLSKIRSPEAEVSCQKWWGKISSRGQ 1157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0651 1157 Gene3D - 825 872 - -
Lele10g0651 1157 SMART MYSc_2a 151 820 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele10g0651 1157 Coils Coil 942 976 - -
Lele10g0651 1157 MobiDBLite consensus disorder prediction 910 932 - -
Lele10g0651 1157 MobiDBLite consensus disorder prediction 1 114 - -
Lele10g0651 1157 Gene3D - 521 709 - -
Lele10g0651 1157 CDD MYSc_Myo8 171 807 IPR036022 -
Lele10g0651 1157 MobiDBLite consensus disorder prediction 86 114 - -
Lele10g0651 1157 Gene3D Myosin VI head, motor domain, U50 subdomain 390 498 - -
Lele10g0651 1157 FunFam Myosin heavy chain 333 389 - -
Lele10g0651 1157 Pfam Myosin head (motor domain) 159 807 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele10g0651 1157 Coils Coil 1060 1080 - -
Lele10g0651 1157 PANTHER MYOSIN 150 1144 - -
Lele10g0651 1157 Gene3D - 333 389 - -
Lele10g0651 1157 MobiDBLite consensus disorder prediction 1032 1052 - -
Lele10g0651 1157 FunFam Unconventional myosin-XIX 521 709 - -
Lele10g0651 1157 ProSiteProfiles IQ motif profile. 880 909 IPR000048 GO:0005515
Lele10g0651 1157 MobiDBLite consensus disorder prediction 1 18 - -
Lele10g0651 1157 Gene3D Kinesin motor domain 156 752 IPR036961 -
Lele10g0651 1157 ProSiteProfiles IQ motif profile. 844 872 IPR000048 GO:0005515
Lele10g0651 1157 Gene3D - 753 820 - -
Lele10g0651 1157 MobiDBLite consensus disorder prediction 60 85 - -
Lele10g0651 1157 MobiDBLite consensus disorder prediction 1032 1058 - -
Lele10g0651 1157 Pfam IQ calmodulin-binding motif 882 899 IPR000048 GO:0005515
Lele10g0651 1157 Pfam IQ calmodulin-binding motif 827 842 IPR000048 GO:0005515
Lele10g0651 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 898 IPR027417 -
Lele10g0651 1157 FunFam Myosin IE heavy chain 390 498 - -
Lele10g0651 1157 SMART iq_5 820 842 IPR000048 GO:0005515
Lele10g0651 1157 SMART iq_5 879 901 IPR000048 GO:0005515
Lele10g0651 1157 SMART iq_5 843 865 IPR000048 GO:0005515
Lele10g0651 1157 PRINTS Myosin heavy chain signature 187 206 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele10g0651 1157 PRINTS Myosin heavy chain signature 284 311 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele10g0651 1157 PRINTS Myosin heavy chain signature 509 537 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele10g0651 1157 PRINTS Myosin heavy chain signature 241 266 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele10g0651 1157 PRINTS Myosin heavy chain signature 562 590 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele10g0651 1157 ProSiteProfiles IQ motif profile. 824 850 IPR000048 GO:0005515
Lele10g0651 1157 ProSiteProfiles Myosin motor domain profile. 157 819 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0651 Lele-ChrLele10 4826495 4834959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0651 1 1151 Myosins gene family AT5G54280 60.343 0.0 1456