Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0649 ATGAACGAGAAGGCTAACGTGTCTAAGGAGCTCAACGCCAAGCATAAAAAGATACTGGAAGGACTTCTTAAATTACCAGAAAATAGGGAGTGTGCTGACTGCAAAGCTAAAGGGCCGAGATGGGCTAGTGTGAATCTAGGCATCTTCATATGCATGCAGTGCTCAGGAATACATCGAAGTCTAGGAGTACATATATCAAAGGTGCGTTCTGCAACTTTGGACACTTGGCTACCAGAGCAGGTTGCCTTCATTCAATCAATGGGAAATGAGAAAGCAAATAGTTACTGGGAAGCAGAGTTACCACCAAATTATGATAGAGTTGGAATTGAGAATTTCATTCGCTCAAAATATGAAGATAAGAGGTGGGCGGCTAAGGATGGGAAACCAAAATCACCTTCCAGTGTGCAGGTAGATAAGGCTTCTTCACATCTGCAGAGGCCAGCTGAAAGATGTGGGCACGGCACTCATGCATCTGGTTCTGAGAATACTTTTGAGGAAAAGAAGAAAATTCAACCATCAAATACAATTCCTGCTGTTATATTTAGTGTTTCCGCTCCCCCAAAAGGACCTCAGCTGGCAATACCTGTCATAAAACCTCAGCATGTTGAGAAAGTGGTAGCGGTGGCACCACAACCTCAAGCTGAGACAACGAAGCCAGCCACTGATATGCCTCAGAGTACCCTTGCAAAAGTTGACTTTGCTACTGATCTGTTTGACATGTTGTCTATGGATGGCCCAAGCGAAAATAATTCAGACACTGCTGCTGCTGCTGCTACAGCTACAGCTGATGATAATAACTGGGCAGGTTTTCAGTCTGCTGCTACAGAGGCATCGACAGAGAAGACTAGTCCCACAAAGGCAGTTGAGAGTACTCCGTCTTCCTCCGGAATTGAGGATCTATTTAAAGATTCATCTTCACCTTCAGTGACACCAAGCTTAATTCCTGAAAAACCACAGAAAGATTTAAAAAATGATATAATGAGCCTCTTTGAGAAGTCCAACATGATGTCTCCATTTGCAATGCATCAACAACAACTTGCCATGCTGGCACAGCAACAGTCCCTTCTAATGGCCGCTGCAGCTAAATCTGCTGGTGGGGACCCCAAGAATCCCGGTAGTTTACAACAATCTGGACTGAATGGGTCCAATATTGCTGTACAAAGTTGGTCAGGTGTTGGCTACCCAATCGCTGGAGCTGTGCCAATGCCTGGTCAGGCAGAGCTATTGAAACTCATGCAGACTGGGAACATGACTCCAGCACAACCTGCTGGAAGCGCTGTTCAATTTCCATCTGGTTTCTACACGATGGGACAAGGTGCTCCGGTTAATGGTACTACGGCCACAACTGGAGGGAGTAAACCTCAGGCCGCAGCTCCGGCATCATTAACCCCTTCACAGTCATCAGGAAAGGACTCTGATTTTTCCTCTTTAACACAAGGGCTGTTTTCGAAACACTGA 1458 0.4568 MNEKANVSKELNAKHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWEAELPPNYDRVGIENFIRSKYEDKRWAAKDGKPKSPSSVQVDKASSHLQRPAERCGHGTHASGSENTFEEKKKIQPSNTIPAVIFSVSAPPKGPQLAIPVIKPQHVEKVVAVAPQPQAETTKPATDMPQSTLAKVDFATDLFDMLSMDGPSENNSDTAAAAATATADDNNWAGFQSAATEASTEKTSPTKAVESTPSSSGIEDLFKDSSSPSVTPSLIPEKPQKDLKNDIMSLFEKSNMMSPFAMHQQQLAMLAQQQSLLMAAAAKSAGGDPKNPGSLQQSGLNGSNIAVQSWSGVGYPIAGAVPMPGQAELLKLMQTGNMTPAQPAGSAVQFPSGFYTMGQGAPVNGTTATTGGSKPQAAAPASLTPSQSSGKDSDFSSLTQGLFSKH 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0649 485 MobiDBLite consensus disorder prediction 273 321 - -
Lele10g0649 485 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 485 IPR044520 GO:0005096
Lele10g0649 485 MobiDBLite consensus disorder prediction 273 313 - -
Lele10g0649 485 CDD ArfGap 19 117 - -
Lele10g0649 485 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Lele10g0649 485 Pfam Putative GTPase activating protein for Arf 17 125 IPR001164 GO:0005096
Lele10g0649 485 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Lele10g0649 485 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Lele10g0649 485 MobiDBLite consensus disorder prediction 440 485 - -
Lele10g0649 485 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
Lele10g0649 485 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Lele10g0649 485 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Lele10g0649 485 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Lele10g0649 485 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Lele10g0649 485 MobiDBLite consensus disorder prediction 121 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0649 Lele-ChrLele10 4802667 4808201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0649 16 118 C2H2 Transcription Factor Family AT4G05330 50.450 1.90e-29 116