Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0635 ATGCGCCTACGAGTATTCTCACATGTTATTAACTCTGATGGGACCCATCTGCCAACAATAAGACAAAGATCATCGTACTTATCTGTGTCTGCGTGTCCCTATAAATATCGACCCCGCCCCTCCAAGCCAAAAGAAAAGAAAGAGATTTCATTTCACAAAATCTCGAGTCGACCCTCTCCTTCTTCAACCTCGTCCTCGCTGTTTTTCTCCTGTATAATCAATCACAACAAAGCGAACATGGGAGTACCAGAGATAGACCCGCTCGCTCAATTGAGCCTACCTCCGGGTTTTCGGTTTTACCCGACTGACGAGGAGCTTCTGGTTCAGTATCTGTGCCAGAAGGTTGCCGGCCACCATTTCTCTCTGCAAATCATTGGCGAAATTGACCTTTACAAATTCGACCCATGGCTTCTTCCAAGCAAAGCCATTTTTGGCGAGAAAGAATGGTACTTCTTCACCCCGAGAGACCGCAAGTACCCAAACGGATCCCGACCCAACAGGGTAGCTGGGTCTGGGTACTGGAAAGCTACCGGAACCGACAAAATCATCACCACCGCTGGTCGAAAAGTTGGCATAAAGAAAGCTCTCGTTTTCTATGTTGGAAAGGCACCGAAAGGCACCAAAACCAATTGGATCATGCACGAGTACCGCCTCCTCGATTCCTCCCGAAAGATCGGAAGCACCAGGCTCGACGATTGGGTTCTGTGCCGGATATATAAGAAGAACTCGAGCTCCCAAAAGATTGCGCCTATGATGGTTCCGATCAAAGAATACGAATACAGTAACGGGACGTCTTCGTCATCGTCGTCCCACCTGGACGAAGTGCTGGAATCGTTGCCAGAAATCGACGACCGGTGTTTCTCGCTGCCACGTGTGAGCTCGCTGAAGACGTGGCAGCAGGAGGAGAAGCTGAATCTTCAGAATCTGAATGGGGGTAATAATTTCATGGAGTGGGCCAACCCGGCGGTTCTGAACTCGGTGGCGGAGTTCATTTCCGGGAACAATCAAACGCAGACCCAATGTCAATCTCAAGGGATGATGAACTACAGTTCAATGAGCGACGTGCAGCGGGTCCCGTCGATCCCGCCGTTGACGGCGCCGGAGGAGGAGGTCCAGAGCGGAGTGAGCAGTTCCGGGTTTTATCAGCAGAGTTCAAATGCATTCCCGCAGGGGTTCGGTAACTCCGTGAATGACCCGTATGGATTCAGATACCCGAATCAGACAATGGGGTTCGGGTTCAGACAATGA 1248 0.5056 MRLRVFSHVINSDGTHLPTIRQRSSYLSVSACPYKYRPRPSKPKEKKEISFHKISSRPSPSSTSSSLFFSCIINHNKANMGVPEIDPLAQLSLPPGFRFYPTDEELLVQYLCQKVAGHHFSLQIIGEIDLYKFDPWLLPSKAIFGEKEWYFFTPRDRKYPNGSRPNRVAGSGYWKATGTDKIITTAGRKVGIKKALVFYVGKAPKGTKTNWIMHEYRLLDSSRKIGSTRLDDWVLCRIYKKNSSSQKIAPMMVPIKEYEYSNGTSSSSSSHLDEVLESLPEIDDRCFSLPRVSSLKTWQQEEKLNLQNLNGGNNFMEWANPAVLNSVAEFISGNNQTQTQCQSQGMMNYSSMSDVQRVPSIPPLTAPEEEVQSGVSSSGFYQQSSNAFPQGFGNSVNDPYGFRYPNQTMGFGFRQ 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0635 415 MobiDBLite consensus disorder prediction 38 53 - -
Lele10g0635 415 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 92 325 - -
Lele10g0635 415 MobiDBLite consensus disorder prediction 37 64 - -
Lele10g0635 415 FunFam NAC domain-containing protein 72-like 102 246 - -
Lele10g0635 415 SUPERFAMILY NAC domain 89 241 IPR036093 GO:0003677|GO:0006355
Lele10g0635 415 Gene3D NAC domain 102 246 IPR036093 GO:0003677|GO:0006355
Lele10g0635 415 Pfam No apical meristem (NAM) protein 94 218 IPR003441 GO:0003677|GO:0006355
Lele10g0635 415 ProSiteProfiles NAC domain profile. 93 241 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0635 Lele-ChrLele10 4698872 4701369 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0635 80 415 NAC Transcription Factor Family AT4G27410 58.192 4.17e-121 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele10g0635 NAM 4.5e-36 No_clan