Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0606 ATGCTGGTCTGCACTTCCTCTTTTTATATCTCTCTCTTCTTCTTCCTCTCAGCTCCCAGCTGCTTCTTCTTCTTCTTCTTCTGCTACCTCCACTTTCAGATCATGGCGTCTCGCTTACCTCTCACCTTCATCCTCCTTCTCAGCCTTCTCTCTCTCTCCCATGCTCGTAACTTCTACGTTGGTAACACAGATGGTTGGGTCTTGAACCCCTCCGAGAGTTACAGCCAATGGTCTTCTCGAAACAGATTTCAGGTCAATGACGTTCTCGTGTTTAAGTACCAGAAGGGTTCGGACTCGGTGTTGGAGGTGAGCAAGGAGGATTACGACAAGTGTAATACCAAGAACCCTATCAAGAAGTTTGAAGATGGTGATTCGCAGATGACGCTTGATCGATCTGGACCTTTCTACTTTATCAGTGGACATGATGGGAATTGTGACAAGGGTCAGAAGTTGATTGTTGTTGTGTTATCTGTCCGATCATCATCACCACAGCCGGGAAAGCCATCGCCTGGTACCCCTCCGGGAACTCCCTCTACTCCCAAAGCTCCTTCTCCTTCTAGTGGAGGCACTACCCCTGGTTCACCTCCAGGATCTCCGATGACCACGCCTACCGTTCCCTCCCCATCTGGTAACCCTCCGCCGTCCACCCCGGCATCTCCTTCCCCGGGAAGTTCTCCCACAGCTCCATCCACATCGCCCAATCCACCATCTCAGGCACCGGGAGGCTCTACGACAAGGCCATCTCCGGGGAACAGTCCTCCGGTGGGTAATTCTCCTTCCACGACACCGTCTTCACCCACTATGGCACCGGGCAATGCACCTGGACAATCATCTCCGGTGGGTAGCTCTCCATCCATGACACCGAACGCACCATCTATGGCTCCGGGAGGATCTCCGACAGGAGGGTCTCCAATGGGTAATGCTCCATCCATGACCCCGAACACACCATCTATGGCTCCGGGAGGATCTCCGATGGGAGCGTCTCCAATGGGCAGTCCTCCGATGGGTTCGGGATCACCGGCGATGTCTCCATCAGCCTTGTCTCCAGCTACTTCACCAGCATCATCTTCGCCTATGGGATCCCCACCGGAACCTACAGCAACCCCTCCATCTGGTTCGCCGGCATCGGGCCCAGCAGGTTCTACAGCACCCTCAACGTCCAATGACTCGACACCGCCGGCTCCATCATCAGCGTGGGCTGAAACTGCTCCGAACTTGTTGGGGTATGCAGTTACTATTATGGTCGGTGCTGCTCTCAGTACCATTTTTGGTGCTTAG 1278 0.5415 MLVCTSSFYISLFFFLSAPSCFFFFFFCYLHFQIMASRLPLTFILLLSLLSLSHARNFYVGNTDGWVLNPSESYSQWSSRNRFQVNDVLVFKYQKGSDSVLEVSKEDYDKCNTKNPIKKFEDGDSQMTLDRSGPFYFISGHDGNCDKGQKLIVVVLSVRSSSPQPGKPSPGTPPGTPSTPKAPSPSSGGTTPGSPPGSPMTTPTVPSPSGNPPPSTPASPSPGSSPTAPSTSPNPPSQAPGGSTTRPSPGNSPPVGNSPSTTPSSPTMAPGNAPGQSSPVGSSPSMTPNAPSMAPGGSPTGGSPMGNAPSMTPNTPSMAPGGSPMGASPMGSPPMGSGSPAMSPSALSPATSPASSSPMGSPPEPTATPPSGSPASGPAGSTAPSTSNDSTPPAPSSAWAETAPNLLGYAVTIMVGAALSTIFGA 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0606 425 SUPERFAMILY Cupredoxins 54 156 IPR008972 -
Lele10g0606 425 MobiDBLite consensus disorder prediction 189 242 - -
Lele10g0606 425 FunFam Early nodulin-like protein 1 55 160 - -
Lele10g0606 425 Gene3D - 54 161 IPR008972 -
Lele10g0606 425 PANTHER BLUE COPPER PROTEIN 56 225 IPR039391 GO:0009055
Lele10g0606 425 MobiDBLite consensus disorder prediction 166 181 - -
Lele10g0606 425 MobiDBLite consensus disorder prediction 373 398 - -
Lele10g0606 425 CDD OsENODL1_like 56 152 IPR041846 -
Lele10g0606 425 Pfam Plastocyanin-like domain 66 149 IPR003245 GO:0009055
Lele10g0606 425 ProSiteProfiles Phytocyanin domain profile. 56 157 IPR003245 GO:0009055
Lele10g0606 425 MobiDBLite consensus disorder prediction 261 296 - -
Lele10g0606 425 MobiDBLite consensus disorder prediction 303 321 - -
Lele10g0606 425 MobiDBLite consensus disorder prediction 159 400 - -
Lele10g0606 425 MobiDBLite consensus disorder prediction 338 355 - -
Lele10g0606 425 MobiDBLite consensus disorder prediction 356 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0606 Lele-ChrLele10 4463265 4464848 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0606 30 264 Phytocyanin Superfamily AT4G27520 44.681 5.38e-53 179
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0606 10 4463265 4464848 Lele10g0606 10 4463265 4464848 ECH
Lele10g0606 10 4463265 4464848 Lele11g0676 11 6446530 6447824 hybridization
Lele10g0606 10 4463265 4464848 Lele12g0663 12 14926413 14928005 hybridization