Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0601 ATGGCAAATAGATTTCCAATTCTCTCCTCCTCTCCCAAACAATTATCCAAACACCTCCATTCATGTCTTCCTTCAATCTACTTCTCAACTGCTTATCCACACCCTCAAGGTCATCATGATGAGGGTGGTGGGGTGACAGGGTTCATGGCTGATGCAGCAAAACAAGGTACGATGAAAGCAGCAGAGGTTGTGGAGAGTGTTGACGAAACAGTAAAGGAGACAGTGGATTTTGCATGGGACTCTACAAAGAAAGCTACACAGAACATCAATGAGACAACAACAGCAGAAGCTGATACCAATGTTGTTGACACAGCTGAGTACAGATGTGCTGAGGATTTAACAGGCCAGCTTGGAGATGGATTTGGCCATAATCAGATACGCACAAGTCCTCGTTCGTATAAAGCAGTAGAAAAAAAACGACAAGCCATGAATCAGAGAAAAAGAAAACGTCTAGAGAAAAGAGCAGTAGCAAGATTTTCTGTATCTTTCAATAAGGCCAAAAGTATAGAGAGGAAACAACCATTCACTGAGAAGTCAAAGGATAACATAATTGAAGAAGCAGAAGATGAAGAAGAGGAAAAGAAGAAAGGGGTTGTTGTTGGTGGGAGTAACAGAAGAGGATCAAGAGGTGGTTATAAAGCTTCTTCAGCTTCCTGTCAAGCAGATAGCTGTGGAGCTAACTTGGCTGATTCAAAGCGATATCATCTCCGGCATAAAGTTTGTGAGTTTCATTCCAAGGCGCCTGTTGTGATGGTTGCAGGGATGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTTCCGTGACATAGGGGAATTTGATGAGGCCAAGAAGAGCTGCCGGAGGAGATTGGCGGAGCATAATGAGAGGCGGCGGAAAAGTAATGCAGAAACTCACAGTGATGGCGGCGAAGGGCATCATCAGAATCCAATGGAAGGGCGTTTCAGGCATGTTGATGACAGAGGAAGACGAGTGAATCAGAAGAACGTTAATAATTCTGGGAATTGGAGCATGTATACAGTCATCACCACCTCCATGGAAAACCACCACATGCGGCGGGACAAAAACAGCTCCGGCGACTCCTTCTCCTTCCCTAGCACCCCTAACCAAGAATCATGCGCTGGGGATGACGTCGCCGATGACTTTGAGTTCGGATCCTTAACCCCAGACTCCCCCTCCAGCGATCCCTCCAGAGCTTCCCCGGCAGATCACATCTTCTTCAACGGCCGCCTCCTCCCTCACTCCTTCCCTCCACTCCAACCCCACCCCGCCATTCTTCTCTATGACCATAATTCTCGCGGCGTTAGCCGAACCAGTAGCAAGAACTCGCACTCCATGGTATTATCGTCTCGAAGCAACAGCACCAACAGTAGAAGCAGTAATTGCAGCAGCGCGAGGACGAGCTCGAGTGATAGTTCTGAGAGAAGGTTGTTTTATAACAGAGTGTCGTCGTCCGGTGGTAGAGCCTGCCAGGGGAATAATAAAATGGTTTATGGGTGTTCGCAGAGGTGGCAATATATAACGCCGGTGCCGGCCACCTCCTTGAGCCGAGACTCGTCGCTTCGGAGGAAAGAAAGGAAGGAGGACTTGGTGAACAAGAAGAAGAAGACGACAAAGAAGAGGGAGGATCAGAGTTTCCCGGTTGGCGGCAGACTTTTCCGGTGGATTGTGATGGCATGCAAAGAGTGCCATGCCTTGGAGCCGTCAAGAAAAGAGAAAATGACGCTGCAAGAGAACGTGAAATAA 1743 0.4802 MANRFPILSSSPKQLSKHLHSCLPSIYFSTAYPHPQGHHDEGGGVTGFMADAAKQGTMKAAEVVESVDETVKETVDFAWDSTKKATQNINETTTAEADTNVVDTAEYRCAEDLTGQLGDGFGHNQIRTSPRSYKAVEKKRQAMNQRKRKRLEKRAVARFSVSFNKAKSIERKQPFTEKSKDNIIEEAEDEEEEKKKGVVVGGSNRRGSRGGYKASSASCQADSCGANLADSKRYHLRHKVCEFHSKAPVVMVAGMRQRFCQQCSRFRDIGEFDEAKKSCRRRLAEHNERRRKSNAETHSDGGEGHHQNPMEGRFRHVDDRGRRVNQKNVNNSGNWSMYTVITTSMENHHMRRDKNSSGDSFSFPSTPNQESCAGDDVADDFEFGSLTPDSPSSDPSRASPADHIFFNGRLLPHSFPPLQPHPAILLYDHNSRGVSRTSSKNSHSMVLSSRSNSTNSRSSNCSSARTSSSDSSERRLFYNRVSSSGGRACQGNNKMVYGCSQRWQYITPVPATSLSRDSSLRRKERKEDLVNKKKKTTKKREDQSFPVGGRLFRWIVMACKECHALEPSRKEKMTLQENVK 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0601 580 MobiDBLite consensus disorder prediction 517 542 - -
Lele10g0601 580 MobiDBLite consensus disorder prediction 350 401 - -
Lele10g0601 580 ProSiteProfiles Zinc finger SBP-type profile. 216 293 IPR004333 GO:0003677
Lele10g0601 580 SUPERFAMILY SBT domain 218 297 IPR036893 GO:0003677|GO:0005634
Lele10g0601 580 MobiDBLite consensus disorder prediction 514 542 - -
Lele10g0601 580 MobiDBLite consensus disorder prediction 282 335 - -
Lele10g0601 580 MobiDBLite consensus disorder prediction 282 325 - -
Lele10g0601 580 MobiDBLite consensus disorder prediction 186 216 - -
Lele10g0601 580 MobiDBLite consensus disorder prediction 357 372 - -
Lele10g0601 580 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 152 487 IPR044817 GO:0003677
Lele10g0601 580 Gene3D - 210 280 IPR036893 GO:0003677|GO:0005634
Lele10g0601 580 Pfam SBP domain 219 292 IPR004333 GO:0003677
Lele10g0601 580 Coils Coil 276 296 - -
Lele10g0601 580 MobiDBLite consensus disorder prediction 433 474 - -
Lele10g0601 580 MobiDBLite consensus disorder prediction 186 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0601 Lele-ChrLele10 4432376 4438726 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0601 209 296 SBP-box Gene Family AT2G33810 61.364 4.96e-33 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele10g0601 SBP 2.1e-28 No_clan