Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0600 ATGGTGGGCTCAGGAGCATCGGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATCCGTCCTCGCCCAAGAGTCAGAGGAGGTAATGGCTGCAAGGTTGGAGACGATAACGGCAGCTTGATGCTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGTTTCAGATTGTCTGGAGGAGATGGAAGGAGAGAATCCTGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGGAAGGTTGCATCTGACAAGTGCCACAAGTGGGTCTTCAAAGAGCCAACAGAATGTGAACCCAACATCTCCAACTACTGGCAGAGCTCATTTGATGCTCTCCCTCCCGAATGGACCGACCAGTTTAATTCAGGCATTCAGACCATCGCTGTAATTCAAGCTGGCCATGGCCTTCTCCAACTTGGCTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTGAGAATGAGGCATACATTTGAATCTCTGGGGTATCAATCTGGGTTCTACCTCTCACAGCTCTTCTCTTCCACAAGAAACACTTCGTCTTCGACTTCGCTACCTTCGAAACCGTCGTCCACCCTGCCGATTGGAGCGCCGCCTCCTCTCTTTAACTGGGGTCAAAGGCCAATGGTAGCTTCAGCTGCGGCAGCTTCAATGCTATCATCACCCAATTTTCAACACACGGCGAGACTCGGAGGGTTCCCACAACAGGCGAAAGACGAGACGCATGTATTTCTGATGCCTCATCATCATTCGTCGTCTGATCAACCACCAGCAACTGCAAGAATGGAAGACATGATGGGAGAGAATGAGAATGACATAAAATGGCCAAATGGGTTGTCCTTCTTCAATGCTCTCACAGGACAAAACGATGATGCTACTAAGCTTTTGTTCAATCCAGAGAGCTTAGATAACAAACCAGCTGACGAAGCATCGAACCCGAACCCAATCGAGTTCTTGAGCTTGGACGGCCATCATCAGACAGAAAGTGGGAGGAAAATGGATAAGTTCAAGAGGAGCTTCACTCTACCTGCTAGAGTGGCTTCATCTTCTTTATCAACCTCCATGGATCATCATCATCAGCAGCAACAACAACAGCGACCTGTGGAATATAGGAACTCTGAAGGAGGTACGTACTCGGATGTTATGGAGACCTTTTTGGAGTAA 1251 0.4828 MVGSGASDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEMEGENPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPPEWTDQFNSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSSSTSLPSKPSSTLPIGAPPPLFNWGQRPMVASAAAASMLSSPNFQHTARLGGFPQQAKDETHVFLMPHHHSSSDQPPATARMEDMMGENENDIKWPNGLSFFNALTGQNDDATKLLFNPESLDNKPADEASNPNPIEFLSLDGHHQTESGRKMDKFKRSFTLPARVASSSLSTSMDHHHQQQQQQRPVEYRNSEGGTYSDVMETFLE 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0600 416 MobiDBLite consensus disorder prediction 327 360 - -
Lele10g0600 416 PANTHER GB|AAF34833.1 1 416 IPR044170 -
Lele10g0600 416 MobiDBLite consensus disorder prediction 376 416 - -
Lele10g0600 416 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 187 IPR025610 -
Lele10g0600 416 MobiDBLite consensus disorder prediction 376 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0600 Lele-ChrLele10 4428402 4430606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0600 20 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.754 4.80e-21 94.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0600 10 4428402 4430606 Lele10g0600 10 4428402 4430606 ECH
Lele10g0600 10 4428402 4430606 Lele11g0670 11 6398346 6400259 hybridization
Lele10g0600 10 4428402 4430606 Lele12g0670 12 14972017 14974233 hybridization