Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0585 ATGGGGGGCGGCGAAGCAAGGAAGAAACCGAAGCGCGCGCAGCTCAATCCCAACTGGATTCAACTCCAACAAAAGCTCAAAACTCGGGGCTCTGATGCTTCAAGACCCTTCAACAACTCAGAAACTGGGACCTCAAACTCAGTATTGGGGAAGCGGAAAGAGAGGCAAGATGAAGAGTCCAATGATTGTGAGATTAATCCTCTTACTCCGGTAAATGATGATTCCAGTGTGACCGATGCAGTAGCCATGGACTGTGAAATGGTTGGTGTTGGTCAAGGAAACAGAAGTGCTCTTGGAAGAGTAACACTGGTTAATAGGTGGGGAAATATTATATATGATGAATTTGTTAGACCGGTCGAGCGTGTTGTTGACTTCCGTACCAAAATTAGTGGCATAAGACCTCGAGACTTAAGAAAAGCAAAGGATTTTTTGGCCGTTCAGAAGAAAGTGGCAGAGTTGATCAAAGGCAGGATCCTTGTGGGACATGCCCTTAACAATGATCTTAAGGCATTATTATTAAGTCATTCCAAGAAGGATATTCGGGATACCTCTGAGTACCAGCCATTTCTAAAATCACATAGCAGAAGAGCTCTTCGACATCTTGCTGCTGAATATCTTGGCGCCAAGATCCAAACTGGGGAGCACTGCCCTATAGACGATGCTCGTGCGGCTATGCTGCTTTATCAAAAGAATAGAAAGGAATGGGAGAAGAGTGTAAAAGATCAAATTCGACTGAAACAGAAGCAGAAAAAACGGAGGCCGAAGAAGAAGCAAAAGAAGGAAGTTTCTCCAGATGGGAATGCCGCGGGAGGTGCTTCATCATAG 825 0.4509 MGGGEARKKPKRAQLNPNWIQLQQKLKTRGSDASRPFNNSETGTSNSVLGKRKERQDEESNDCEINPLTPVNDDSSVTDAVAMDCEMVGVGQGNRSALGRVTLVNRWGNIIYDEFVRPVERVVDFRTKISGIRPRDLRKAKDFLAVQKKVAELIKGRILVGHALNNDLKALLLSHSKKDIRDTSEYQPFLKSHSRRALRHLAAEYLGAKIQTGEHCPIDDARAAMLLYQKNRKEWEKSVKDQIRLKQKQKKRRPKKKQKKEVSPDGNAAGGASS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0585 274 MobiDBLite consensus disorder prediction 24 71 - -
Lele10g0585 274 CDD REX4_like 81 229 IPR037431 GO:0006364|GO:0008408
Lele10g0585 274 Gene3D - 75 255 IPR036397 GO:0003676
Lele10g0585 274 MobiDBLite consensus disorder prediction 48 62 - -
Lele10g0585 274 SMART exoiiiendus 79 237 IPR013520 -
Lele10g0585 274 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 36 249 - -
Lele10g0585 274 MobiDBLite consensus disorder prediction 24 47 - -
Lele10g0585 274 Pfam Exonuclease 81 228 IPR013520 -
Lele10g0585 274 MobiDBLite consensus disorder prediction 238 274 - -
Lele10g0585 274 SUPERFAMILY Ribonuclease H-like 80 229 IPR012337 -
Lele10g0585 274 MobiDBLite consensus disorder prediction 244 258 - -
Lele10g0585 274 FunFam Interferon-stimulated exonuclease gene 20 76 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0585 Lele-ChrLele10 4317259 4320228 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g0585 80 234 C2H2 Transcription Factor Family AT5G40310 36.257 1.15e-28 110