Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g0572 ATGGCTTCCACTGCTCAAAAGGTTCTGGTTCTGATTGCGAATGGCACTGAGCCTATGGAGGCTGTGATTAAGATCGATGTTCTCCGACGATCGGGAGCTGACGTTACCGTTGCTTCTGCTGGGAAGCAGCTTCGGGTCGAAGCTCTACATGGCGTCAAGATTATTGCTGATGCTCCTGTTTCTGATGTTGCTGATACTGCTTTCGACCTTGTCGCTTTACCTGGAGGTGTTCCAGGTGTGGATAATCTCAGAGACTGTGAAACTTTGGAAAGCTTAGTGAAAAAGCACGTTGCAGATGGACGGCTTTATGCTGCAGTATGCGCTGCTCCTGCTGTGGTACTTGGATCATGGGGCTTGCTCAAGGGACTGAAGGCAACTGGCCATCCATCATTTATGGAAAAACTGGCCTCTTATGCGACTGCTGTGGAATCAATAGTGCAGCTGGATGGAAGAGTTGTGACAAGCCGTGCACCAGGCACTACCATGGACTTTCGCGTGGCACTGGTTGAGCAGTTATATGGAAAGGAGAAGGCCAACGAAGTTGCTGGTCCACTGGTCATGCGATCCAATCATGGGGATGAATACACTTTTACTGAGCTAAACCCAGTCCAATGGACATGTGATAATCCCCCCAAGGTTTGAGCAAAGGCAAATGTTGTAGTTGCTTCTGTTGAGGATAAAGTAGAGATTGTAGCTTCTCGGAAAGTTAAACTGGAGGCAGATATGCTCCTTGATGAGGCAGCTAAACTTACATATGACCTAATTGTGCTGCCAGGTGGAATTGGGGGTGCCCAAGCTTTTGCAAATTCAGAAACTCTGGTCAGTTTGCTGAAAAAGCAGAGAGAATCAAACAGATATTATGGAGCGATTTGTGCATCCCCAGCATTAGTCTTGGAGCCCCATGGCTTGGTAAAGGGTAAGAAGGCCACTGCCTTTCCTGCTATGTGCAGCAAGCTATCAGATCAGAGCGAAATTGAAAACAGGGTCGTGGTTGACGGCAACCTTATTACCAGCAGAGGACCAGGGACCTCCATGGAGTTTGCATTTACTATTGTGGAAAAGCTATTTGGGCGGCAGTTAGGACTTGAACTTGCAAAAGCGATGGTCTTCACACGCGCATAG 1122 0.4804 MASTAQKVLVLIANGTEPMEAVIKIDVLRRSGADVTVASAGKQLRVEALHGVKIIADAPVSDVADTAFDLVALPGGVPGVDNLRDCETLESLVKKHVADGRLYAAVCAAPAVVLGSWGLLKGLKATGHPSFMEKLASYATAVESIVQLDGRVVTSRAPGTTMDFRVALVEQLYGKEKANEVAGPLVMRSNHGDEYTFTELNPVQWTCDNPPKVXAKANVVVASVEDKVEIVASRKVKLEADMLLDEAAKLTYDLIVLPGGIGGAQAFANSETLVSLLKKQRESNRYYGAICASPALVLEPHGLVKGKKATAFPAMCSKLSDQSEIENRVVVDGNLITSRGPGTSMEFAFTIVEKLFGRQLGLELAKAMVFTRA 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g0572 373 Gene3D - 2 199 IPR029062 -
Lele10g0572 373 Gene3D - 213 373 IPR029062 -
Lele10g0572 373 CDD GATase1_DJ-1 8 172 - -
Lele10g0572 373 CDD GATase1_DJ-1 223 355 - -
Lele10g0572 373 Pfam DJ-1/PfpI family 7 171 IPR002818 -
Lele10g0572 373 Pfam DJ-1/PfpI family 215 353 IPR002818 -
Lele10g0572 373 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 6 185 - -
Lele10g0572 373 SUPERFAMILY Class I glutamine amidotransferase-like 7 189 IPR029062 -
Lele10g0572 373 FunFam Protein DJ-1 homolog C 1 190 - -
Lele10g0572 373 TIGRFAM not_thiJ: DJ-1 family protein 7 183 IPR006287 -
Lele10g0572 373 TIGRFAM not_thiJ: DJ-1 family protein 216 366 IPR006287 -
Lele10g0572 373 SUPERFAMILY Class I glutamine amidotransferase-like 215 371 IPR029062 -
Lele10g0572 373 FunFam Protein DJ-1 homolog C 213 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g0572 Lele-ChrLele10 4194212 4197532 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g0572 10 4194212 4197532 Lele10g0572 10 4194212 4197532 ECH
Lele10g0572 10 4194212 4197532 Lele11g0632 11 6137644 6145912 hybridization
Lele10g0572 10 4194212 4197532 Lele12g0702 12 15200106 15203465 hybridization